Rv3244c - c.1548T>C
Drug resistance types
5 Sensitive
1 RR-TB
28 HR-TB
3 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La2;lineage4.9;lineage9 | 1 |
| lineage4.9 | 24 |
| La3;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3 | 2 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| 2 | |
| lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| ERR176643 | Other | La3;lineage4.9 | None |
| ERR4816656 | Other | lineage4.9 | None |
| SRR1172817 | Other | La3 | None |
| ERR736867 | Other | lineage2.1;lineage4.9 | None |
| ERR176751 | Other | lineage4.9 | None |
| SRR5341467 | Other | lineage4.9 | None |
| SRR1183111 | HR-TB | lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| SRR5341299 | HR-TB | lineage4.9 | None |
| ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR987722 | MDR-TB | None | |
| ERR502524 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR29096410 | Other | lineage4.9 | None |
| ERR4819241 | Other | lineage4.9 | None |
| SRR1173778 | Other | lineage4.9 | None |
| ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR502511 | Sensitive | lineage4.9 | None |
| ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR323039 | HR-TB | La2;lineage4.9 | None |
| ERR124636 | Sensitive | lineage4.9 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None |
| ERR4815441 | HR-TB | lineage4.9 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| SRR5341453 | Other | lineage4.9 | None |
| SRR1172728 | RR-TB | La3 | None |
| SRR5341308 | Sensitive | lineage4.9 | None |
| SRR29097026 | Other | lineage4.9 | None |
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| ERR3283042 | Other | lineage4.9 | None |
| SRR1196768 | MDR-TB | None | |
| SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
| ERR4818929 | HR-TB | lineage4.9 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR5341300 | HR-TB | lineage4.9 | None |
| ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR5341461 | HR-TB | lineage4.9 | None |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
