Rv0667 - c.1362C>G
Drug resistance types
26 Sensitive
126 RR-TB
115 HR-TB
27 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| La1 | 2 |
| 103 | |
| lineage4.9 | 158 |
| La1.8.1 | 5 |
| lineage4 | 11 |
| lineage6.1.1 | 2 |
| La1.3 | 4 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1 | 29 |
| lineage1.1.2 | 1 |
| lineage3 | 11 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.1.2.1 | 10 |
| lineage4.6.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2 | 4 |
| lineage6.1.3 | 1 |
| lineage4.8 | 2 |
| lineage6 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.4.2 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3.1 | 3 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1 | 1 |
| lineage4.6.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 391 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283010 | Other | La1 | None | ERR133986 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797061 | Other | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4188350 | HR-TB | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR4769452 | HR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769450 | HR-TB | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769521 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR4811493 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736865 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787336 | Other | lineage6 | None | ERR987722 | HR-TB | None | SRR1013670 | Sensitive | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1013671 | Sensitive | lineage2.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1020011 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1049064 | Sensitive | lineage2.2.1 | None | SRR1049065 | Sensitive | lineage2.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861168 | RR-TB | lineage4.9 | None | SRR13861196 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861202 | RR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861255 | RR-TB | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861366 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861475 | RR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861491 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861517 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861553 | Sensitive | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861599 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR13861678 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861703 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14782405 | HR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1791696 | Other | La1.8.1 | None | SRR16156832 | RR-TB | None | SRR1640750 | HR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR6325445 | HR-TB | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4815310 | Other | None | SRR3675488 | HR-TB | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | SRR3675234 | Other | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR3275220 | Other | lineage3 | nl | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675555 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816656 | HR-TB | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR4818536 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | SAMN02360614 | Sensitive | lineage2.2.1 | kr | ERR2446144 | Other | lineage3 | nl | ERR4817584 | MDR-TB | lineage3 | None | ERR4818958 | Other | lineage4.1.1 | gb | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341418 | Other | None | ERR4819623 | Sensitive | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR1023509 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | ERR4820026 | Other | lineage3 | None | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693232 | Other | lineage4.9 | None | ERR2693254 | Other | None | SRR6045519 | HR-TB | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045053 | Other | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6325442 | HR-TB | None | SRR6046397 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046492 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4830353 | Other | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831117 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | ERR294266 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR502889 | Other | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311081 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7535086 | Other | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323041 | HR-TB | None | ERR067681 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063855 | Other | lineage4 | None |
|---|
