EBG00000313339 - n.404T>C


Drug resistance types
14 Sensitive 2 RR-TB 18 HR-TB 7 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 26 Other
lineage Counts
lineage Count
La1.7 1
lineage4.2.1.1;lineage4.3.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1 5
lineage4.9 20
lineage4.9;lineage9 2
La2;lineage4.9;lineage9 1
lineage4.6.2.2 2
lineage2.2.1.1 4
La3;lineage4.9 5
lineage6.1.1 2
2
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
lineage4.5 1
lineage4.9.1 1
La2;lineage4.9 1
lineage4.3.2.1 1
lineage4.4.1.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La3;lineage2.1;lineage4.9 1
La1.7;lineage4.9 2
lineage3.1.2.2 1
M.canetti;lineage4.9 1
La1.2.BCG 1
lineage4.6.3;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 68
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675222 Other La1.7 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4799547 HR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR3675541 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR3799304 Other lineage6.1.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR12708416 Sensitive None
ERR212033 Other lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR17832802 HR-TB lineage3 None
SRR29096410 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4811030 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR245758 Other lineage4.9.1 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1169306 Other La3;lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR176751 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3283042 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR400345 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1181328 Other lineage2.2.1 None
SRR6045371 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None