lineage | Count |
---|---|
16 | |
lineage3 | 18 |
lineage4.3.3 | 2 |
lineage4.1.2.1 | 7 |
lineage3.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage2.2.1 | 7 |
lineage4.9 | 5 |
La2 | 1 |
lineage1.1.3.1 | 2 |
lineage2.2.1.1 | 1 |
lineage6.1.3 | 1 |
lineage4.2.1.1 | 2 |
lineage4.4.1.2 | 1 |
lineage1.2.2.2 | 2 |
lineage4.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.8 | 5 |
lineage4 | 1 |
lineage4.3.4.1 | 1 |
lineage4.4 | 1 |
La3 | 1 |
lineage2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage3.1.3 | 1 |
spoligotype | Count |
---|---|
None | 83 |
ID | Drug resistance | Lineage | Country iso2 | ERR2693230 | Other | None | ERR4821641 | Other | lineage3 | gb | ERR2693254 | Other | None | ERR2693257 | Other | None | ERR4821980 | Sensitive | lineage3 | None | ERR4821705 | Sensitive | None | SRR6257050 | Pre-XDR-TB | lineage4.3.3 | None | SRR6044829 | Sensitive | lineage4.1.2.1 | gb | SRR6044884 | Other | lineage3.1.1 | gb | ERR3077946 | HR-TB | lineage3 | None | ERR5165793 | Sensitive | lineage4.3.3 | None | ERR3077953 | Other | lineage4.2.2.2 | None | ERR4832046 | MDR-TB | lineage2.2.1 | None | ERR4831846 | Sensitive | lineage4.1.2.1 | vn | ERR3797061 | Other | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3797044 | Other | None | SRR9940994 | Sensitive | lineage4.9 | None | ERR10430693 | Sensitive | La2 | None | ERR3797017 | Other | None | ERR400381 | Other | lineage1.1.3.1 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | ERR5336163 | Other | lineage6.1.3 | None | ERR9117748 | Other | lineage3 | None | SRR11972160 | MDR-TB | lineage2.2.1 | None | ERR4132444 | Sensitive | lineage4.2.1.1 | None | ERR6358991 | HR-TB | None | SRR6797635 | Other | lineage2.2.1 | None | SRR20139571 | HR-TB | lineage4.1.2.1 | None | SRR6650117 | Sensitive | lineage4.4.1.2 | None | SRR6650175 | Sensitive | lineage1.2.2.2 | None | SRR6650345 | Other | lineage1.1.3.1 | None | ERR4814479 | Sensitive | lineage4.9 | None | SRR6650230 | MDR-TB | lineage2.2.1 | None | ERR4814350 | HR-TB | lineage3 | None | ERR4814439 | Sensitive | lineage4.2.1 | None | ERR4815464 | Sensitive | lineage4.1.2.1 | None | ERR4815706 | Sensitive | lineage4.3.4.2.1 | None | ERR4815962 | Sensitive | lineage2.2.1 | None | ERR181744 | HR-TB | None | ERR4814701 | Sensitive | lineage3 | gb | SRR3675289 | MDR-TB | lineage2.2.1 | gb | SRR3675361 | Other | lineage1.1.2 | gb | SRR3675234 | Other | None | ERR1750926 | Other | lineage4.3.2.1 | za | ERR4815718 | Sensitive | lineage3 | None | SRR3675250 | HR-TB | lineage3 | None | SRR3675242 | Sensitive | lineage3 | gb | ERR2229003 | Sensitive | lineage4.8 | dk | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816302 | Sensitive | lineage4.9 | None | ERR2229743 | Sensitive | lineage4 | None | ERR212121 | HR-TB | None | ERR4816674 | Sensitive | lineage3 | gb | SRR3675579 | Sensitive | lineage3 | gb | ERR2229230 | Sensitive | lineage4.8 | None | ERR2229649 | Sensitive | lineage4.8 | None | ERR2432998 | MDR-TB | lineage4.3.4.1 | br | ERR2229419 | Sensitive | lineage4.8 | dk | ERR4818082 | Sensitive | lineage4.9 | None | ERR2513207 | Sensitive | lineage3 | gb | ERR2512525 | Sensitive | lineage1.2.2.2 | None | ERR2512642 | Other | lineage4.4 | gb | ERR4818280 | Other | lineage4.1.2.1 | gb | ERR2512629 | Sensitive | lineage3 | gb | ERR2513321 | Sensitive | lineage3 | gb | ERR2512788 | Sensitive | La3 | None | ERR2513708 | Sensitive | lineage2.1 | None | ERR2513611 | Sensitive | lineage4.3.4.2 | None | ERR2513354 | Sensitive | lineage3 | None | ERR2514277 | Sensitive | lineage4.1.2.1 | None | ERR2513871 | Sensitive | lineage3 | gb | ERR2514213 | Sensitive | lineage3 | gb | ERR4819291 | Sensitive | lineage4.9 | None | ERR2514318 | Sensitive | lineage3 | gb | ERR2514974 | HR-TB | lineage4.2.1.1 | gb | ERR2514551 | Sensitive | lineage4.8 | gb | ERR2514599 | Sensitive | lineage3.1.3 | gb | SRR5341219 | Sensitive | None | ERR2514735 | Sensitive | lineage2.2.1 | gb | ERR2693231 | Other | None |
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