Rv0006 - c.2011C>T
Drug resistance types
2 Sensitive
0 RR-TB
19 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| 21 | |
| lineage3.1.2 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.7 | 1 |
| lineage4.9 | 3 |
| lineage4.1.2.1 | 2 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage3 | 1 |
| lineage4.3.2 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage9;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815604 | HR-TB | None | SRR22251429 | Sensitive | lineage3.1.2 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675311 | Other | None | ERR4816999 | Other | None | SRR3675572 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | ERR4819932 | Other | lineage4.7 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6044855 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | ERR3283010 | Other | La1 | None | SRR7496509 | Other | None | SRR6046540 | HR-TB | None | ERR502532 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR3283027 | HR-TB | None | ERR5336148 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR17856672 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR3283036 | HR-TB | None | ERR3797069 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR702406 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR19303884 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None |
|---|
