Rv0667 - c.2947T>C


Drug resistance types
0 Sensitive 7 RR-TB 41 HR-TB 32 MDR-TB 3 Pre-XDR-TB 4 XDR-TB 52 Other
lineage Counts
lineage Count
lineage4.9;lineage6.3 2
2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
La1.7;M.canetti;lineage4.9 3
lineage2.1;lineage6.3 2
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La3;lineage4.9 4
lineage4.9 22
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage3 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.9 4
lineage2.1 2
lineage2.1;lineage4.9 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.6.2.2 4
M.canetti;lineage2.1;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.2;lineage4.9 1
lineage6.1.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.3.4.2.1 1
M.canetti;lineage4.9;lineage9 1
lineage3.1;lineage9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.2 3
lineage2.1;lineage2.2;lineage6.3 1
La3;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9;lineage7 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage4.9 3
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.1.1.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage1 1
lineage4.1;lineage4.8 1
La1.7 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La3;lineage2 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4.1.2.1 1
lineage4 1
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.2.1.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage7 1
La1.7;lineage3;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 139
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28119717 Other lineage4.9;lineage6.3 None
SRR25827682 Other None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3801503 Other lineage4.6.2.2 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787153 Other lineage6.1.3 None
ERR4769452 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9786843 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR20969677 HR-TB La3;lineage2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046485 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR28045835 Other lineage3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR387051 RR-TB lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12006550 Other lineage1.2.1.2 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283018 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None