Rv1173 - c.582T>C
Drug resistance types
69 Sensitive
4 RR-TB
167 HR-TB
17 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
106 Other
lineage Counts
| lineage | Count |
|---|---|
| 163 | |
| La1 | 1 |
| lineage4.9 | 52 |
| lineage4 | 56 |
| La1.8.1 | 2 |
| lineage4.1.3 | 2 |
| lineage2.2.1 | 14 |
| La1.2 | 1 |
| lineage2 | 3 |
| lineage3 | 5 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4 | 2 |
| lineage4.3.2 | 1 |
| lineage2.2 | 7 |
| lineage4.1.2.1 | 10 |
| lineage4.6.2.2 | 2 |
| lineage4.8 | 3 |
| lineage6.3.1 | 1 |
| lineage6 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.3.3 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1 | 4 |
| lineage4.5 | 2 |
| lineage1.1.2 | 2 |
| lineage1.1.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 3 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.8;La3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 373 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283017 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797014 | Other | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4188350 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR8976043 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6866410 | Sensitive | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786604 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787197 | Other | None | ERR990545 | Other | lineage3 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172817 | HR-TB | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172857 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1172951 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173153 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR13837766 | Sensitive | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837519 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861629 | RR-TB | lineage4.9 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR17658572 | Sensitive | lineage1.1.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR25827682 | Other | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR176779 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675311 | Other | None | SRR3675234 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR181887 | HR-TB | None | ERR4816999 | Other | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4816466 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR2229176 | Sensitive | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816656 | HR-TB | None | ERR2229384 | Sensitive | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR234659 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4819051 | Other | lineage4 | None | SRR5007188 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818615 | Other | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341467 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045952 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046397 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323036 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6789626 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR7496509 | Other | None | ERR5311081 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323041 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None |
|---|
