Rv0006 - c.1125G>C
Drug resistance types
5 Sensitive
1 RR-TB
21 HR-TB
7 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.9 | 11 |
| lineage5.2 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.1 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| La1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.8 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR5341456 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR11662683 | HR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR11662642 | MDR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR10808730 | Other | lineage4.9 | None |
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