lineage | Count |
---|---|
44 | |
lineage4 | 16 |
lineage4.3.2.1 | 1 |
lineage2.2.1 | 2 |
lineage4.1 | 1 |
lineage4.1.2 | 1 |
lineage4.4.1.2 | 1 |
La1 | 1 |
lineage4.8 | 1 |
La3 | 1 |
lineage2.2.1.1 | 1 |
lineage3.1.2.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.3.4 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341456 | Other | None | SRR5341313 | HR-TB | None | SRR5341418 | Other | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR5341330 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502889 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1035122 | Sensitive | None | ERR067699 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067681 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283028 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR6866410 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | SRR1183145 | Other | lineage2.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR14782405 | HR-TB | None | ERR181744 | HR-TB | None | SRR15465778 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675571 | HR-TB | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None |
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