Rv1908c - c.396T>C
Drug resistance types
3 Sensitive
24 RR-TB
114 HR-TB
116 MDR-TB
20 Pre-XDR-TB
3 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.X-unk4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 24 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.9 | 35 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage4.8 | 1 |
| lineage3 | 6 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.1;lineage4.9 | 6 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1 | 32 |
| lineage4 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage2.2.2 | 20 |
| lineage4.1.2.1 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.5 | 3 |
| La1.7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2;lineage4 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage4.4.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage1.1 | 1 |
| M.canetti;lineage4.9 | 4 |
| La1.7;lineage4.9 | 3 |
| lineage2.2.2;lineage4 | 5 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| 2 | |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.4.2 | 3 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage2;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 5 |
| lineage4.3.4.2.1 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.7.1 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.6.2.2 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage3.1;lineage9 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 289 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675482 | RR-TB | lineage4.9 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048993 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917710 | RR-TB | lineage4.1.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4830353 | HR-TB | La1.7 | None | SRR6044815 | RR-TB | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048992 | HR-TB | lineage2.2;lineage4 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR3675243 | MDR-TB | lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR3275196 | RR-TB | lineage2.2.1 | nl | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR987722 | MDR-TB | None | ERR212001 | HR-TB | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1048980 | HR-TB | lineage3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | SRR1048983 | HR-TB | lineage2.2.1.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1049023 | HR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675507 | RR-TB | lineage4.9 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR1048965 | HR-TB | lineage2.2.1 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4821053 | RR-TB | lineage3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1048852 | HR-TB | lineage2.2;lineage4.9 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1049004 | HR-TB | lineage2.2.2 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1034791 | MDR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR1049040 | HR-TB | lineage2 | None | SRR1048988 | HR-TB | lineage2.2.1 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR3468607 | RR-TB | lineage4.9 | None | SRR1048981 | HR-TB | lineage3 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1013568 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None |
|---|
