Rv1908c - c.396T>C


Drug resistance types
11 Sensitive 5 RR-TB 186 HR-TB 34 MDR-TB 40 Pre-XDR-TB 0 XDR-TB 53 Other
lineage Counts
lineage Count
lineage4.6.2.2 2
lineage2.2.1 43
lineage2.2 28
104
lineage4.1.1.3 1
lineage3.1 2
La2 1
lineage4.9 36
lineage4.3.4.2.1 2
lineage4.6.1.2 1
lineage4.8 7
lineage4.4.1.2 1
lineage4 28
lineage4.1.2.1 9
lineage4;lineage3.1 1
lineage3 7
La1 1
lineage3.1.2 1
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage2.2.2 21
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.2 5
lineage2.2.1.1 3
lineage4;lineage2.2.2 1
lineage2.2.2;lineage2.2.1 2
lineage4.5 5
lineage4.9;lineage2 1
La3 1
lineage1.1.2 2
La1.7.1 1
lineage9;lineage3.1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.1 1
lineage4.2;La1.7 1
lineage3;lineage2.1 1
lineage4.3 1
lineage2.1 1
lineage1.1.1 1
lineage1.1 1
spoligotype Counts
spoligotype Count
None 329
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6832249 Other lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR294248 HR-TB None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6855916 Sensitive lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
ERR323036 HR-TB None
ERR502524 HR-TB La2 None
ERR5311090 HR-TB None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323041 HR-TB None
ERR502889 Other None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR8217918 HR-TB None
SRR7535077 MDR-TB lineage4.6.1.2 None
SRR7535080 HR-TB lineage4.8 None
ERR323038 HR-TB None
ERR323039 HR-TB None
ERR323055 HR-TB None
ERR323063 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323053 HR-TB None
ERR323108 HR-TB lineage4 None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1063839 HR-TB lineage2.2 None
ERR108471 HR-TB lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1063857 HR-TB None
ERR3283024 Other None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
ERR3283017 HR-TB None
ERR3445501 HR-TB None
ERR3283032 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR3445502 HR-TB lineage4 None
ERR3468544 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3468622 HR-TB lineage4.9 None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797044 Other None
ERR3797017 Other None
ERR3797061 Other None
ERR3797083 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR403298 HR-TB lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188350 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR473303 Sensitive lineage4.9 None
ERR4187652 Other lineage4.9 None
ERR4769521 HR-TB None
ERR473367 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4798823 HR-TB lineage4 None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4796351 MDR-TB lineage4.9 None
ERR4798648 HR-TB lineage3.1.2 None
ERR5917710 Other lineage4.1.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR736835 HR-TB None
ERR6358837 HR-TB None
ERR6359070 Other lineage4.9 None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6866807 HR-TB lineage4 None
ERR736865 HR-TB None
ERR736839 Other None
ERR7821163 Other lineage2.2.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR8976043 HR-TB None
ERR987722 HR-TB None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR069978 Pre-XDR-TB lineage2.2.2 None
ERR9891974 Sensitive lineage4.8 None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR1013554 Pre-XDR-TB lineage2.2 None
SRR069981 HR-TB lineage2.2.2 None
SRR1013566 Pre-XDR-TB lineage4.4.2 None
SRR1013553 Pre-XDR-TB lineage2.2 None
SRR1013565 Pre-XDR-TB lineage4.4.2 None
SRR1013578 MDR-TB lineage2.2 None
SRR1013568 Pre-XDR-TB lineage2.2 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR1013583 HR-TB lineage2.2 None
SRR1013577 MDR-TB lineage2.2 None
SRR1013581 Pre-XDR-TB lineage2.2 None
SRR1013582 Pre-XDR-TB lineage2.2.1 None
SRR1013589 HR-TB lineage2.2.1 None
SRR1013584 HR-TB lineage2.2 None
SRR1013595 HR-TB lineage3 None
SRR1013590 HR-TB lineage2.2.1 None
SRR1013597 HR-TB lineage2.2 None
SRR1013599 HR-TB None
SRR1013598 HR-TB None
SRR1013596 HR-TB lineage3 None
SRR1013607 HR-TB lineage2.2 None
SRR1013600 HR-TB lineage2.2.1.1 None
SRR1013604 HR-TB lineage2.2.1 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1013609 HR-TB lineage4 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1013608 HR-TB lineage2.2 None
SRR1013613 HR-TB lineage2.2.1 None
SRR1013610 HR-TB lineage4 None
SRR1013612 HR-TB lineage4 None
SRR1013611 HR-TB lineage4 None
SRR1013614 HR-TB lineage2.2 None
SRR1013621 Pre-XDR-TB lineage2.2 None
SRR1013617 MDR-TB None
SRR1013618 MDR-TB None
SRR1013633 MDR-TB lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2 None
SRR1013629 Pre-XDR-TB lineage2.2 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1013634 MDR-TB lineage2.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR1048853 Pre-XDR-TB lineage4;lineage2.2.2 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SRR1048865 Pre-XDR-TB lineage4.4.2 None
SRR1048852 Pre-XDR-TB lineage4.9 None
SRR1048869 Pre-XDR-TB lineage2.2.2 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
SRR1048885 MDR-TB None
SRR1048870 Pre-XDR-TB lineage2.2 None
SRR1048968 HR-TB lineage2.2.2;lineage2.2.1 None
SRR1048965 Pre-XDR-TB lineage2.2.1 None
SRR1048886 MDR-TB lineage2.2 None
SRR1048966 Pre-XDR-TB lineage2.2.1 None
SRR1048969 MDR-TB lineage2.2.2 None
SRR1048974 HR-TB lineage2.2.1 None
SRR1048975 HR-TB lineage2.2.1 None
SRR1048982 HR-TB None
SRR1048983 HR-TB None
SRR1048980 HR-TB lineage3 None
SRR1048991 HR-TB lineage2.2.2 None
SRR1048985 HR-TB lineage2.2.1 None
SRR1048987 HR-TB lineage2.2.1 None
SRR1048988 HR-TB lineage2.2 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1048992 HR-TB lineage2.2.2 None
SRR1048994 HR-TB lineage4.9 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1048995 HR-TB lineage4.5 None
SRR1048993 HR-TB lineage4.9 None
SRR1048996 HR-TB lineage4.5 None
SRR1049005 MDR-TB lineage2.2.2 None
SRR1048998 HR-TB lineage2.2.1 None
SRR1049004 MDR-TB lineage2.2.2 None
SRR1049022 HR-TB lineage4.9;lineage2 None
SRR1049006 MDR-TB lineage2.2.2 None
SRR1049026 Pre-XDR-TB None
SRR1049023 HR-TB lineage2.2 None
SRR1049007 Pre-XDR-TB lineage2.2.2 None
SRR1049041 MDR-TB None
SRR1049027 Pre-XDR-TB None
SRR1049040 MDR-TB lineage2.2.1 None
SRR1169306 Other None
SRR1144744 HR-TB lineage2.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1169249 Other La3 None
SRR1144759 MDR-TB lineage2.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1172310 HR-TB None
SRR1172885 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1174291 HR-TB lineage1.1.2 None
SRR1175052 HR-TB lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183049 Other lineage2.2 None
SRR1181289 Other lineage2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13861399 Other lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13837703 Sensitive lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR19303813 HR-TB lineage4.8 None
SRR1640750 HR-TB None
SRR1792478 HR-TB La1.7.1 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR8692790 RR-TB lineage4 None
SRR3675464 HR-TB lineage4.1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR6325445 HR-TB None
SRR3675482 HR-TB None
ERR1035239 HR-TB None
ERR158583 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR161033 HR-TB None
SRR3675488 HR-TB None
SRR3675486 HR-TB None
ERR4814639 HR-TB lineage4 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR3675284 HR-TB lineage4.9 None
ERR4815471 Other lineage4.9 None
SRR3675234 Other None
SRR3675501 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675280 HR-TB lineage4.9 None
ERR176643 HR-TB None
SRR3675456 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR176740 HR-TB None
SRR3675383 HR-TB None
ERR176751 HR-TB None
ERR4816964 Other lineage4.9 None
ERR212001 HR-TB None
SRR3675510 Other None
SAMN02360581 HR-TB lineage2.2.1 None
ERR4816151 Other lineage4.8 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR3675545 HR-TB None
SRR3675550 Other None
ERR212034 HR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR212033 HR-TB None
SRR3675558 HR-TB None
SRR3675555 HR-TB None
ERR2229159 Sensitive lineage4.8 None
ERR212121 HR-TB None
ERR4816466 HR-TB None
ERR212138 HR-TB lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229198 MDR-TB lineage4.8 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR1034791 RR-TB None
SAMN02360590 MDR-TB lineage2.2.2 None
SAMN02360571 HR-TB lineage2.2.2;lineage2.2.1 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
SAMN02398710 MDR-TB lineage2.2.2 None
ERR3275196 Other lineage2.2.1 nl
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4819314 Other lineage1.1.1 None
ERR4818929 HR-TB None
ERR4818561 HR-TB lineage4 None
SAMN02360577 HR-TB lineage3 None
SRR5341373 HR-TB lineage4 None
SRR5341400 HR-TB lineage4 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
ERR4819357 Other lineage4.9 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SAMN02598978 HR-TB lineage1.1.2 None
ERR4819546 HR-TB lineage3 None
SRR5341418 Other None
ERR4819933 Other lineage4.9 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341293 HR-TB lineage4 None
ERR2515807 Sensitive lineage2.2.1 None
ERR2446563 Other lineage2.2.1 nl
SRR5341313 HR-TB None
SAMN02360585 HR-TB lineage4.5 None
ERR2693231 Other None
ERR2693230 Other None
SRR5341470 HR-TB None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR2693257 Other None
ERR2693254 Other None
SRR6045519 HR-TB None
SRR6045832 HR-TB lineage4.9 None
ERR278594 HR-TB None
ERR2693227 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045002 MDR-TB lineage4.9 None
SRR6045233 HR-TB None
SRR6046210 Other lineage4 None
SRR6046225 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6046514 HR-TB None
SRR6046362 HR-TB None
SRR6046395 HR-TB lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
ERR4830353 Other None
SRR6046460 HR-TB None
SRR6325442 HR-TB None
SRR6325444 HR-TB None
SRR6046482 HR-TB None
SRR6046644 HR-TB None
SRR6325448 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325447 HR-TB None
SRR6046824 HR-TB None
ERR3077978 Other lineage1.1 None