Rv0668 - c.1923G>T
Drug resistance types
51 Sensitive
1 RR-TB
107 HR-TB
6 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| 112 | |
| lineage4 | 39 |
| lineage4.1.2.1 | 5 |
| lineage2.2 | 4 |
| lineage1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| La1.8.1 | 2 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage3 | 3 |
| lineage4.8 | 1 |
| lineage2.2.1 | 6 |
| lineage2 | 1 |
| La3 | 1 |
| lineage4.1 | 2 |
| lineage9;lineage3.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage2.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 218 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046611 | HR-TB | lineage4.9 | None | ERR4830353 | Other | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | SRR6831950 | Other | lineage4.3.3 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3468544 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR4812155 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736839 | Other | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR9119669 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR990545 | Other | lineage3 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR023492 | Sensitive | lineage2.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1173788 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR161033 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675488 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675270 | HR-TB | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675501 | HR-TB | None | SRR3675234 | Other | None | SRR3675247 | Other | lineage4.9 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675522 | Other | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | ERR2693231 | Other | None | ERR4821053 | Other | lineage3 | None | SRR5341470 | HR-TB | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045086 | Other | lineage3 | None | SRR6325442 | HR-TB | None | SRR6046397 | Other | None | SRR6046225 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None |
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