Rv0667 - c.1794T>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
59 Sensitive
12 RR-TB
43 HR-TB
26 MDR-TB
5 Pre-XDR-TB
1 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 93 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.9;lineage7 | 5 |
| lineage2.2.1 | 15 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage4 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage4.6.2.2 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.4 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.2.BCG | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| 4 | |
| lineage3 | 4 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.6.5 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.4.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.1.1.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.1.2 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage2;lineage4 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage4.2.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 206 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR387051 | Other | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR751326 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR926164 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7240033 | Other | La1.8.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR28044882 | Other | lineage3.1.2.1 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR3797029 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR28351347 | Other | lineage3 | None | ERR1063896 | Sensitive | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736848 | Other | lineage4.9 | None | SRR1049672 | Other | lineage3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4821276 | Sensitive | lineage3 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR926163 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1791747 | Other | La1.8.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR212123 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR10808730 | Other | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6044952 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1181403 | Other | lineage4.9 | None |
|---|
