Rv0667 - c.1794T>C
Drug resistance types
46 Sensitive
28 RR-TB
53 HR-TB
39 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 43 |
| lineage3 | 5 |
| 43 | |
| lineage4 | 53 |
| lineage3.1.1 | 2 |
| lineage4.2.1 | 4 |
| La1.8.1 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.6.2.2 | 4 |
| lineage9;lineage3.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.4 | 1 |
| lineage4.8 | 4 |
| lineage4.1.2.1 | 3 |
| lineage2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.8.2 | 1 |
| lineage2.2.1 | 18 |
| lineage4.1.1.3.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| La3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1.1 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.7 | 2 |
| lineage2.2 | 5 |
| lineage4.6.1.1 | 2 |
| lineage4.4.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 228 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR15244369 | Pre-XDR-TB | lineage4 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR20632814 | Sensitive | lineage4 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4814623 | Other | lineage4.8 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR212001 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR4817069 | RR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229442 | HR-TB | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4820192 | Other | La3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045519 | HR-TB | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821276 | Other | lineage3 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044897 | Sensitive | lineage4.9 | None | SRR6045320 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045399 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6789628 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR3077961 | MDR-TB | lineage4.3.3 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283021 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133825 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6358979 | Other | None | ERR5865194 | MDR-TB | lineage2.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119669 | HR-TB | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786843 | Other | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1013618 | MDR-TB | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1049041 | MDR-TB | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1140736 | RR-TB | None | SRR1158918 | Sensitive | lineage4 | None |
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