Rv0668 - c.594C>T
Drug resistance types
46 Sensitive
0 RR-TB
15 HR-TB
7 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| 7 | |
| lineage3.1;lineage9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.9 | 32 |
| lineage4.1.2.1 | 40 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| lineage4.8 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.7 | 2 |
| lineage4 | 2 |
| La3;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| La1.6;La3;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.1.2.1;lineage4.6.2.2 | 1 |
| lineage4.1.2.1;lineage6.3.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7496509 | Other | None | ERR4815604 | Other | None | ERR9117709 | Other | None | ERR9787197 | Other | None | SRR3675236 | Other | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR3804156 | Sensitive | lineage4.1.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786399 | Sensitive | lineage4.1.2.1 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR9786585 | Sensitive | lineage4.1.2.1 | None | ERR9786304 | Sensitive | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR9786390 | Sensitive | lineage4.1.2.1 | None | ERR349265 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR11081314 | Sensitive | lineage4.1.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR4816615 | Sensitive | lineage4.1.2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4822095 | Sensitive | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | SRR3675457 | Other | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR9786922 | Sensitive | lineage4.1.2.1 | None | ERR176651 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR8774072 | Sensitive | lineage4.1.2.1 | None | SRR6046046 | Other | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR9786313 | Sensitive | lineage4.1.2.1 | None | ERR9786426 | Sensitive | lineage4.1.2.1 | None | ERR3797069 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4815386 | Sensitive | lineage4.1.2.1 | gb | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR8774069 | Sensitive | lineage4.1.2.1 | None | ERR9786523 | Sensitive | lineage4.1.2.1 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR373946 | Other | lineage4.9 | None | ERR8774068 | Sensitive | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9786286 | Sensitive | lineage4.1.2.1;lineage4.6.2.2 | None | ERR9786879 | Sensitive | lineage4.1.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR7496472 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR9786226 | Sensitive | lineage4.1.2.1 | None | ERR9786531 | Sensitive | lineage4.1.2.1;lineage6.3.1 | None | ERR4815607 | Sensitive | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR12268437 | Sensitive | lineage4.1.2.1 | None | ERR8774070 | Sensitive | lineage4.1.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR9786522 | Sensitive | lineage4.1.2.1 | None | ERR373947 | Other | lineage4.9 | None | ERR3799546 | Sensitive | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR8774088 | Sensitive | lineage4.1.2.1 | None | SRR19303774 | Sensitive | lineage4.1.2.1 | None | SRR18213713 | HR-TB | None | ERR4816999 | Other | None | ERR4818028 | Sensitive | lineage4.1.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR363421 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR12268383 | Sensitive | lineage4.1.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR22251477 | Sensitive | lineage4.1.2.1 | None | ERR9901063 | Sensitive | lineage4.1.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR8774084 | Sensitive | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR181887 | Other | lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR8774086 | Sensitive | lineage4.1.2.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR9786570 | Sensitive | lineage4.1.2.1 | None | ERR9786160 | Sensitive | lineage4.1.2.1 | None | ERR9786530 | Sensitive | lineage4.1.2.1 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR363502 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815752 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9786345 | Sensitive | lineage4.1.2.1 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None |
|---|
