lineage | Count |
---|---|
La1 | 1 |
40 | |
lineage4 | 41 |
lineage4.9 | 10 |
lineage4.1.2.1 | 41 |
lineage4.1.3 | 2 |
lineage2.2.1 | 5 |
lineage4.3.2 | 1 |
lineage4.6.2.2;lineage4.1.2.1 | 1 |
lineage4.1 | 1 |
lineage6.3.1;lineage4.1.2.1 | 1 |
lineage4.8 | 1 |
lineage4.5 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.1.1.1 | 1 |
lineage2.1 | 1 |
lineage2.2 | 1 |
lineage4.3.2.1 | 1 |
La1.8.1 | 1 |
lineage4.1.1 | 1 |
lineage4;lineage1.1 | 1 |
lineage4.7 | 2 |
lineage4.4.1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 158 |
ID | Drug resistance | Lineage | Country iso2 | ERR3283010 | Other | La1 | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR12268437 | Sensitive | lineage4.1.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR736867 | HR-TB | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4178226 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797069 | Other | None | ERR3799546 | Sensitive | lineage4.1.2.1 | None | ERR3804156 | Sensitive | lineage4.1.2.1 | None | ERR4798431 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR12268383 | Sensitive | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | SRR22251477 | Sensitive | lineage4.1.2.1 | None | ERR8774084 | Sensitive | lineage4.1.2.1 | None | ERR8774068 | Sensitive | lineage4.1.2.1 | None | ERR8774086 | Sensitive | lineage4.1.2.1 | None | ERR8774069 | Sensitive | lineage4.1.2.1 | None | ERR8774088 | Sensitive | lineage4.1.2.1 | None | ERR8774070 | Sensitive | lineage4.1.2.1 | None | ERR9786160 | Sensitive | lineage4.1.2.1 | None | ERR8774072 | Sensitive | lineage4.1.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117709 | HR-TB | None | ERR9786426 | Sensitive | lineage4.1.2.1 | None | ERR9786226 | Sensitive | lineage4.1.2.1 | None | ERR9786313 | Sensitive | lineage4.1.2.1 | None | ERR9786304 | Sensitive | lineage4.1.2.1 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786286 | Sensitive | lineage4.6.2.2;lineage4.1.2.1 | None | ERR9786345 | Sensitive | lineage4.1.2.1 | None | ERR9786390 | Sensitive | lineage4.1.2.1 | None | ERR9786399 | Sensitive | lineage4.1.2.1 | None | ERR9786523 | Sensitive | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786531 | Sensitive | lineage6.3.1;lineage4.1.2.1 | None | ERR9786522 | Sensitive | lineage4.1.2.1 | None | ERR9786570 | Sensitive | lineage4.1.2.1 | None | ERR9786530 | Sensitive | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR9786585 | Sensitive | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787197 | Other | None | ERR9901063 | Sensitive | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786879 | Sensitive | lineage4.1.2.1 | None | ERR9786922 | Sensitive | lineage4.1.2.1 | None | SRR19303774 | Sensitive | lineage4.1.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR19303884 | HR-TB | None | SRR8692800 | Other | lineage4 | None | ERR11081314 | Sensitive | lineage4.1.2.1 | None | SRR8692898 | Other | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR8692825 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815607 | Other | lineage4.1.2.1 | None | ERR176779 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4816999 | Other | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | SRR3675510 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816283 | Other | lineage4.1.2.1 | None | SRR3675572 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR4033473 | HR-TB | lineage4.3.2.1 | None | ERR4816615 | Sensitive | lineage4.1.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4818615 | Other | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR4818028 | Other | lineage4.1.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2513642 | Sensitive | lineage4.1.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341313 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819932 | Other | lineage4.7 | None | SRR6046046 | Other | None | ERR2693254 | Other | None | ERR4822095 | Sensitive | lineage4.1.2.1 | None | SRR5341315 | Sensitive | None | SRR6045503 | HR-TB | None | ERR4821578 | Other | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046305 | Other | lineage4.9 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6046540 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4815386 | Sensitive | lineage4.1.2.1 | gb | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR7496509 | Other | None | ERR1035157 | Other | lineage4.9 | None |
---|