Rv0006 - c.336C>T
Drug resistance types
21 Sensitive
0 RR-TB
13 HR-TB
5 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 24 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 2 |
| 1 | |
| lineage4.8 | 1 |
| M.canetti;lineage1 | 1 |
| lineage3.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage2.2 | 2 |
| lineage6.1.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341373 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR29096882 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR29096709 | Sensitive | lineage4.9 | None | SRR29097060 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR15014682 | MDR-TB | lineage4.8 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR28351442 | HR-TB | lineage3.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR13265833 | Other | lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | SRR29096795 | Sensitive | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR6358979 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR29231298 | Sensitive | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | SRR29096530 | Sensitive | lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR20970016 | Other | lineage2.2 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None |
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