Rv0006 - c.336C>T


Drug resistance types
21 Sensitive 0 RR-TB 13 HR-TB 5 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 15 Other
lineage Counts
lineage Count
La1.7;lineage4.9;lineage7 3
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.9 24
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.1 2
lineage3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1.2.1 2
lineage3.1;lineage9 1
lineage3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2 2
lineage4.8 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4.2 1
lineage4 1
M.canetti;lineage4.2;lineage4.9 1
lineage6.1.3 1
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage7 1
La3;lineage4.9 1
lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 56
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR6358979 Other lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
ERR323115 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR29231298 Sensitive lineage4.9 None
SRR29096530 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4797264 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR26399239 Sensitive lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR28351347 Other lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR20969708 HR-TB lineage2.2 None
SRR15014682 MDR-TB lineage4.8 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797184 Sensitive lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR3273109 HR-TB lineage4 None
ERR13285191 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR20970016 Other lineage2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR29096882 Sensitive lineage4.9 None
SRR29096709 Sensitive lineage4.9 None
SRR29097060 Sensitive lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR323107 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR8692887 Other None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR124636 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR13265833 Other lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR29096795 Sensitive lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None