lineage | Count |
---|---|
119 | |
lineage4 | 14 |
La3 | 1 |
lineage2.2.1 | 1 |
lineage2.2 | 5 |
lineage4.5 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.3 | 1 |
lineage4.9 | 4 |
La2 | 1 |
lineage3.1.2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 151 |
ID | Drug resistance | Lineage | Country iso2 | ERR8976043 | HR-TB | None | SRR1167384 | Other | lineage4 | None | ERR9786671 | Other | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172817 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172310 | HR-TB | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR12416824 | HR-TB | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR3675465 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR19304036 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR161033 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675270 | HR-TB | None | SRR3675234 | Other | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675311 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | SRR5007188 | Other | lineage4 | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341418 | Other | None | SRR5341333 | HR-TB | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | ERR2693257 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045892 | Sensitive | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046046 | Other | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046397 | Other | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | ERR294266 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR323041 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR1063857 | HR-TB | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283027 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3439432 | Other | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797017 | Other | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR4798406 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4811022 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702406 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None |
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