Rv0667 - c.3120C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
8 Sensitive
0 RR-TB
6 HR-TB
42 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.2 | 40 |
| lineage4.9 | 20 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7.1 | 13 |
| lineage2.2.1 | 4 |
| lineage4.1.2.1 | 2 |
| lineage4.7 | 2 |
| 9 | |
| lineage4.9;lineage6.3 | 3 |
| lineage2.1;lineage4.9 | 6 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage3.1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| lineage1.1.2 | 1 |
| La1.8.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.8.1 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3 | 2 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 121 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1654664 | MDR-TB | lineage4.6.1.2 | None | SRR29230786 | MDR-TB | lineage4.6.1.2 | None | SRR7496472 | Other | lineage4.9 | None | ERR3014592 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR3675221 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR23961471 | Other | La1.7.1 | None | ERR2707084 | MDR-TB | lineage4.6.1.2 | cd | ERR2706990 | MDR-TB | lineage4.6.1.2 | cd | ERR2707026 | MDR-TB | lineage4.6.1.2 | cd | ERR2706925 | MDR-TB | lineage4.6.1.2 | cd | ERR4814352 | Other | lineage2.2.1 | None | SRR21690574 | Other | lineage4.1.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR4818615 | Sensitive | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR13199720 | Other | La1.7.1 | None | SRR1183684 | Other | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR7496517 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR29231739 | MDR-TB | lineage4.6.1.2 | None | SRR29231001 | MDR-TB | lineage4.6.1.2 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046066 | Other | lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1;lineage4.9 | None | SRR23961517 | Other | La1.7.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR23961476 | Other | La1.7.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR23961402 | Other | La1.7.1 | None | SRR29231826 | MDR-TB | lineage4.6.1.2 | None | ERR4815752 | Other | lineage4.9 | None | SRR29231844 | MDR-TB | lineage4.6.1.2 | None | SRR29231685 | MDR-TB | lineage4.6.1.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3283044 | Other | lineage4 | None | SRR13199751 | Other | La1.7.1 | None | SRR29231679 | MDR-TB | lineage4.6.1.2 | None | SRR29231815 | MDR-TB | lineage4.6.1.2 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR3675549 | Other | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR7496509 | Other | None | SRR1183339 | Other | lineage4.9 | None | SRR26159066 | Sensitive | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR13199732 | Other | La1.7.1 | None | SRR23961504 | Other | La1.7.1 | None | ERR2707070 | MDR-TB | lineage4.6.1.2 | cd | ERR2707020 | MDR-TB | lineage4.6.1.2 | cd | ERR2707060 | MDR-TB | lineage4.6.1.2 | cd | ERR2707057 | MDR-TB | lineage4.6.1.2 | cd | ERR2707012 | MDR-TB | lineage4.6.1.2 | cd | ERR2706921 | MDR-TB | lineage4.6.1.2 | cd | ERR2707123 | MDR-TB | lineage4.6.1.2 | cd | ERR2707132 | MDR-TB | lineage4.6.1.2 | cd | ERR2706919 | MDR-TB | lineage4.6.1.2 | cd | ERR2707024 | MDR-TB | lineage4.6.1.2 | cd | ERR4819781 | Other | lineage2.2.1 | None | ERR1199098 | MDR-TB | lineage4.6.1.2 | cd | ERR1199103 | MDR-TB | lineage4.6.1.2 | cd | ERR1199105 | MDR-TB | lineage4.6.1.2 | cd | ERR1199113 | MDR-TB | lineage4.6.1.2 | cd | ERR1199096 | MDR-TB | lineage4.6.1.2 | cd | SRR3675572 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR29231840 | MDR-TB | lineage4.6.1.2 | None | ERR1654675 | MDR-TB | lineage4.6.1.2 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR29231725 | MDR-TB | lineage4.6.1.2 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR29231676 | MDR-TB | lineage4.6.1.2 | None | SRR23961496 | Other | La1.7.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR1654693 | MDR-TB | lineage4.6.1.2 | None | SRR23961509 | Other | La1.7.1 | None | SRR3675275 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4815604 | Other | None | SRR13199724 | Other | La1.7.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR1654669 | MDR-TB | lineage4.6.1.2 | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | ERR11081864 | Other | lineage3 | None | SRR29230780 | MDR-TB | lineage4.6.1.2 | None | SRR13199725 | Other | La1.7.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR1654674 | MDR-TB | lineage4.6.1.2 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR4816999 | Other | None | ERR1654682 | MDR-TB | lineage4.6.1.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819932 | Sensitive | lineage4.7 | None | SRR29231653 | MDR-TB | lineage4.6.1.2 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR13199739 | Other | La1.7.1 | None | ERR4818831 | Other | lineage3 | None | ERR9117709 | Other | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR29231795 | MDR-TB | lineage4.6.1.2 | None |
|---|
