TB-Profiler
Home
Upload
SRA data
Rv0682
- c.300T>A
Drug resistance types
5 Sensitive
0 RR-TB
3 HR-TB
0 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
2 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
6
lineage2.2.1
2
lineage3.1;lineage9
1
lineage1.2.1.2
1
La3;lineage4.9
1
Showing 1 to 5 of 5 entries
Previous
1
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
11
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034634
HR-TB
lineage4.9
None
ERR2693252
Sensitive
lineage4.9
None
ERR4821655
HR-TB
lineage4.9
None
ERR6359066
HR-TB
lineage4.9
None
ERR7821163
Other
lineage2.2.1
None
SRR10808399
Sensitive
lineage4.9
None
SRR10808668
Sensitive
lineage2.2.1
None
SRR10808730
Other
lineage4.9
None
SRR12006550
Sensitive
lineage1.2.1.2
None
SRR25827418
XDR-TB
lineage3.1;lineage9
None
Showing 1 to 10 of 11 entries
Previous
1
2
Next