Rv1854c - c.186T>C


Drug resistance types
3 Sensitive 4 RR-TB 36 HR-TB 10 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 18 Other
lineage Counts
lineage Count
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage4.1.3 2
lineage4.9 19
lineage2.2.1.2;lineage7 1
M.canetti;lineage4.9 2
La1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage3.1;lineage9 1
La1.2.BCG 1
La1.7;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.5 1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;lineage2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.1.3;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 72
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR363498 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4819877 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR363500 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4796475 Sensitive lineage4.5 in
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363449 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6046382 RR-TB lineage2.2.1 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816478 HR-TB lineage4 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR373947 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR369162 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR387051 RR-TB lineage4.9 None