TB-Profiler
Home
Upload
SRA data
Rv3457c
- c.-469_-467delATCinsGG
Drug resistance types
5 Sensitive
3 RR-TB
11 HR-TB
7 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
17 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
18
lineage2.2.1
2
lineage4.9;lineage9
2
M.canetti;lineage4.9
2
2
lineage4.6.2.2
1
lineage3.1.2.2
1
lineage4.2;lineage4.6.3;lineage4.9.1
1
lineage2.1;lineage4.9;lineage6.3
1
lineage3.1;lineage9
1
Showing 1 to 10 of 25 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
46
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063846
HR-TB
lineage4.9
None
ERR11252612
Other
La3;lineage4.9
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR212001
HR-TB
None
ERR2514692
Other
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
ERR3290633
Other
lineage4.2;lineage4.6.3;lineage4.9.1
None
ERR3797029
Other
lineage4.9
None
ERR405219
HR-TB
La1.7;lineage3.1;lineage4
None
ERR4188247
HR-TB
lineage4.9
None
Showing 1 to 10 of 46 entries
Previous
1
2
3
4
5
Next