Rv3457c - c.-469_-467delATCinsGG
Drug resistance types
9 Sensitive
16 RR-TB
24 HR-TB
17 MDR-TB
1 Pre-XDR-TB
4 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 2 |
| lineage4.9 | 39 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.9;lineage9 | 2 |
| La3;lineage4.9 | 5 |
| lineage6.1.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.5 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La2;lineage4.9 | 1 |
| lineage4 | 1 |
| La1.7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 6 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 1 |
| 3 | |
| M.canetti;lineage2.2 | 2 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.2.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage3.1;lineage9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 3 |
| lineage2.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage3.1.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 118 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR926157 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4811031 | Other | lineage4.5 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR2514692 | Other | None | ERR3797029 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR926156 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR926163 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR9786843 | Other | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR212033 | Other | lineage4.9 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR9896144 | Other | lineage3 | None | ERR702406 | Other | lineage2.1 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR990545 | RR-TB | lineage3 | None | SRR6045526 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR926160 | Other | lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None |
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