Rv0486 - c.495G>C
Drug resistance types
137 Sensitive
5 RR-TB
112 HR-TB
11 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| 124 | |
| lineage4.9 | 58 |
| lineage4 | 99 |
| lineage1.1.2 | 5 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage3 | 3 |
| lineage4.8 | 3 |
| lineage5.1.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1 | 17 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| La1.2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.5 | 1 |
| lineage4.3.4 | 2 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.8.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 354 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | SRR5341300 | Other | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR1035162 | Other | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341453 | Sensitive | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | ERR2514692 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | ERR2693254 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341470 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6045399 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR294266 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283031 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866547 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR4811030 | Sensitive | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9634265 | Sensitive | None | ERR987722 | HR-TB | None | SRR10315567 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1167384 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1169306 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1174897 | HR-TB | None | SRR1180250 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR17658565 | Other | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675502 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR158583 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675265 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR181887 | HR-TB | None | SRR3675279 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675522 | Other | None | SRR3675510 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR212033 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None |
|---|
