Rv0486 - c.495G>C


Drug resistance types
70 Sensitive 8 RR-TB 85 HR-TB 29 MDR-TB 7 Pre-XDR-TB 1 XDR-TB 98 Other
lineage Counts
lineage Count
lineage4.9 127
La1.2.BCG 1
lineage4.8;lineage4.9 2
lineage4.6.3;lineage4.9 1
3
lineage3 5
La1.7;lineage4.9 8
lineage4.9;lineage7 3
lineage2.1;lineage4.9;lineage7 1
lineage4.6.2.2 1
lineage4.9;lineage6.3 2
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
La3;lineage4.9 10
lineage3.1;lineage9 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.3.3 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage1.1.2 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 4
lineage4.9;lineage9 2
La1.7;lineage4.3.4.1 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
lineage4.3.2.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
lineage4.2.1 1
lineage4.3.4.2.1 4
lineage4 4
lineage1.1.3.1 1
La1;lineage4.1.2 1
M.canetti;lineage4.9 5
lineage2.2.1 13
lineage4.3.4.1 1
lineage2.2.1;lineage4.1.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage2.2.1;lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 5
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2.2 1
La2;lineage4.9 1
lineage6.1.3 2
lineage1;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1;lineage4.9 2
La2;lineage4.9;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.8.1 1
lineage2.1;lineage4.9 1
La1.2;La1.8.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.2 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.1.2.1 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 298
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6359082 Other lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR2514692 Other None
SRR28044873 Pre-XDR-TB lineage3 None
SRR10808730 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4796254 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR323066 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR29096882 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR502511 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6358979 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR29096195 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675267 Other La1.7;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SRR6045219 HR-TB lineage4.9 None
ERR13265833 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR29231479 RR-TB lineage4.9 None
SRR29096685 Sensitive lineage4.9 None
SRR29096527 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
SRR29096225 Sensitive lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR176751 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR29097026 Other lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
SRR1180270 Other lineage2.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR28351342 HR-TB lineage2.2.1;lineage4 None
SRR5341387 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063896 Sensitive None
SRR1180444 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR736848 Other lineage4.9 None
SRR29096710 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR14782054 Other lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR5341366 Sensitive lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR10808805 Other La1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4799378 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR4797193 HR-TB lineage1.1.2 None
ERR779852 Sensitive lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
SRR28351339 MDR-TB lineage4 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR176651 Other lineage4.9 None
ERR137286 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR28351347 Other lineage3 None
ERR4810624 MDR-TB lineage2.2 None
SRR6044875 Sensitive lineage4.9 None
ERR387051 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR3797048 Other La3;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR212123 Other lineage4.9 None
SRR29096194 Sensitive lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341303 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR1034634 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR323085 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None