Rv3795 - c.921C>G
Drug resistance types
21 Sensitive
2 RR-TB
44 HR-TB
13 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
115 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage4.9 | 66 |
| lineage4.9.1 | 1 |
| lineage2.2.1 | 10 |
| lineage2.2 | 1 |
| 14 | |
| La3;lineage4.9 | 2 |
| lineage3 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.1.3 | 2 |
| lineage4.1.1.3 | 4 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage4.9 | 14 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage6.3.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;lineage2.2.1 | 2 |
| lineage2.2.2;lineage4 | 1 |
| La1;lineage4.9 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.8.1 | 1 |
| lineage2.1 | 3 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La1.7 | 1 |
| La3;lineage2.2.2 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3 | 1 |
| lineage4.8 | 3 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| La3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR11466061 | Sensitive | lineage4.9.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR6789626 | Other | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR28119753 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | SRR28119777 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9117709 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR1184381 | MDR-TB | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR25827682 | Other | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR6785227 | Other | lineage2.2.1 | None | SRR3675572 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4407463 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR29051077 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4816999 | Other | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR29093909 | Other | lineage4.9 | None | SRR29051093 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675236 | Other | None | ERR176779 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675221 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR29096541 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR29097004 | Other | lineage3 | None | SRR29093099 | MDR-TB | La3;lineage2.2.2 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR751326 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR234659 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1196566 | Other | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR176651 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR1063896 | Sensitive | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None |
|---|
