Rv0668 - c.876C>T
Drug resistance types
50 Sensitive
4 RR-TB
15 HR-TB
3 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 5 |
| lineage4.9 | 32 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1 | 4 |
| M.canetti | 11 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.8.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage7 | 4 |
| M.canetti;lineage1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La2;M.canetti | 1 |
| lineage3.1;lineage9 | 1 |
| La3;M.canetti | 9 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage3 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| SRR1180312 | Sensitive | lineage4.9 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| SRR24061597 | Sensitive | M.canetti | None |
| SRR1181325 | Sensitive | lineage4.9 | None |
| SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
| ERR1336822 | Sensitive | M.canetti | None |
| SRR1180345 | Other | lineage4.9 | None |
| ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
| SRR1180300 | Sensitive | lineage4.9 | None |
| ERR3597004 | Sensitive | M.canetti | None |
| SRR10522763 | Sensitive | M.canetti | None |
| SRR1180444 | Sensitive | lineage4.9 | None |
| SRR1180946 | Sensitive | lineage2;lineage4.9 | None |
| ERR564372 | Other | La1.8.1 | None |
| SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| SRR1175487 | Sensitive | lineage4.9 | None |
| SRR1180148 | Sensitive | lineage4.9 | None |
| SRR1180420 | Sensitive | lineage4.9 | None |
| SRR1181283 | Sensitive | lineage4.9 | None |
| SRR3675582 | Other | lineage4.9 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| ERR11465151 | Sensitive | lineage4.3.4.1 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR551181 | Sensitive | M.canetti | None |
| SRR1180977 | Sensitive | lineage4.9 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| SRR1175512 | Sensitive | lineage4.9 | None |
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| SRR1180399 | Sensitive | lineage4.9 | None |
| ERR9787153 | Other | lineage6.1.3 | None |
| ERR551182 | Sensitive | M.canetti | None |
| SRR11972367 | Sensitive | lineage2.2.1 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
| SRR1181351 | Sensitive | lineage4.9 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR1180355 | Sensitive | lineage4.9 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR1175513 | Sensitive | lineage4.9 | None |
| SRR1180410 | Sensitive | lineage4.9 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| ERR266126 | Sensitive | La2;M.canetti | None |
| SRR1180250 | Other | lineage4.9 | None |
| ERR551179 | Sensitive | M.canetti | None |
| SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
| ERR266125 | Other | La3;M.canetti | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None |
| SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None |
| SRR1184021 | Sensitive | lineage4.9 | None |
| SRR10522783 | Sensitive | M.canetti | None |
| SRR10315751 | MDR-TB | lineage4.8 | None |
| ERR11465279 | Sensitive | lineage4.3.4.1 | None |
| SRR1183054 | Sensitive | lineage4.9 | None |
| SRR5216831 | Other | La1.8.1 | None |
| ERR176751 | Other | lineage4.9 | None |
| ERR1043164 | Other | La3;M.canetti | None |
| SRR29017081 | Sensitive | lineage4.9 | None |
| SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
| SRR1181402 | Sensitive | lineage4.9 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| ERR1043163 | Other | La3;M.canetti | None |
| SRR10808730 | Other | lineage4.9 | None |
| SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
| ERR1336823 | Sensitive | La3;M.canetti | None |
| ERR400529 | Other | lineage3 | None |
| SRR1180406 | Sensitive | lineage4.9 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR12142339 | HR-TB | lineage2.2.1 | None |
| SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
| SRR1180391 | Sensitive | lineage4.9 | None |
| SRR1792478 | HR-TB | La1.7.1 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| ERR1336824 | Sensitive | La3;M.canetti | None |
| ERR4830353 | Other | La1.7 | None |
| SRR6046492 | Other | lineage4.9 | None |
| ERR1336825 | Sensitive | La3;M.canetti | None |
| ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| SRR29231479 | RR-TB | lineage4.9 | None |
| SRR18289195 | Sensitive | M.canetti | None |
| ERR266120 | Sensitive | M.canetti | None |
| SRR1181349 | Sensitive | lineage4 | None |
| ERR1336820 | Sensitive | La3;M.canetti | None |
| SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
| SRR3675488 | Other | La1.7;lineage4.9 | None |
| ERR1336821 | Sensitive | La3;M.canetti | None |
| SRR9971080 | RR-TB | lineage2.2.1 | None |
| SRR1180413 | Sensitive | lineage4.9 | None |
| ERR1336826 | Sensitive | La3;M.canetti | None |
| ERR551180 | Sensitive | M.canetti | None |
| SRR5341456 | Other | lineage4.9 | None |
| SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
| ERR4811493 | HR-TB | lineage4.9 | None |
