Rv1173 - c.2145T>C


Drug resistance types
3 Sensitive 10 RR-TB 29 HR-TB 11 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 52 Other
lineage Counts
lineage Count
lineage3 4
lineage4.6.2.2 5
lineage2.2.1 7
lineage4.9 18
8
lineage3.1;lineage9 1
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 6
La3;lineage4.9 2
La3;lineage1.1.2 1
lineage4.3.4.2.1 1
lineage2.1 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.3 3
M.canetti;lineage1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.9;lineage6.3 4
lineage4.9;lineage7 3
lineage6.3.1 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.1;lineage4.8 2
M.canetti;lineage4.9 3
La3;lineage4.3.4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.6.1.1 1
lineage4 1
lineage2.2.1;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
lineage1.1.1 1
La3;lineage2 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 108
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR17658565 Pre-XDR-TB lineage3 None
ERR9786645 Other lineage4.6.2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR161037 HR-TB lineage4.9 None
ERR4407463 HR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR702406 Other lineage2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR6045555 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502912 Other lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR22048477 Sensitive lineage4.3.3 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1180137 RR-TB lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR212001 HR-TB None
ERR4800341 HR-TB lineage3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR9787139 Other lineage6.3.1 None
SRR13423649 Other lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR6046133 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3801503 Other lineage4.6.2.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR9786843 Other None
ERR234659 HR-TB None
ERR2514692 Other None
ERR4798262 HR-TB La1.2.BCG None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR19303796 Other lineage4.3.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR19303906 Sensitive lineage4.3.3 None
SRR15368760 MDR-TB lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR4797201 Other lineage1.2.2.2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4797588 MDR-TB lineage3 None
SRR12416840 MDR-TB lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None