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SRA data
Rv3245c
- c.354T>C
Drug resistance types
3 Sensitive
0 RR-TB
10 HR-TB
2 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
7 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.3.2.1
8
3
M.canetti;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage4.1.2.1
2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
lineage3.1;lineage9
1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
La3;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
23
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11464987
HR-TB
lineage4.3.2.1
None
ERR190346
Sensitive
lineage4.3.2.1
mw
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR3283026
HR-TB
lineage4.2;lineage4.6.3;lineage4.9.1
None
ERR3797028
HR-TB
M.canetti;lineage4.9
None
ERR5311091
Other
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
None
ERR5918058
HR-TB
lineage4.3.2.1
za
ERR8975425
HR-TB
lineage4.3.2.1
None
Showing 1 to 10 of 23 entries
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