Rv0005 - c.1917C>T
Drug resistance types
20 Sensitive
0 RR-TB
12 HR-TB
9 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 22 |
| lineage2.2.1 | 9 |
| lineage3 | 6 |
| 2 | |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.3.3 | 1 |
| lineage5.1.4 | 1 |
| lineage4 | 1 |
| La2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage5.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.4.1.1 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR28045479 | Sensitive | lineage3 | None | ERR987722 | MDR-TB | None | ERR2510568 | Pre-XDR-TB | lineage3 | pk | SRR1180226 | HR-TB | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR25515457 | Pre-XDR-TB | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR25534372 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4798278 | MDR-TB | lineage3 | in | ERR369151 | Other | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR13265833 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | SRR25534322 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR25515057 | Pre-XDR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR25515466 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR29441017 | Sensitive | lineage3 | None | SRR30182744 | Other | lineage3 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR25515424 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4820224 | Sensitive | lineage3 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR25515458 | Pre-XDR-TB | lineage2.2.1 | None | ERR751326 | Other | lineage4.9 | None | SRR25515471 | Pre-XDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None |
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