Rv0005 - c.1917C>T


Drug resistance types
10 Sensitive 0 RR-TB 15 HR-TB 14 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 6 Other
lineage Counts
lineage Count
lineage4.9 21
lineage2.2.1 8
La2;lineage4.9 1
2
lineage3 4
lineage4.1.1.3 1
lineage4.9;lineage6.3 1
lineage4.4.1.1 1
lineage1.1.3.1 1
lineage4 1
lineage4.1.2.1 1
lineage1.2.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage9 2
La3;lineage4.3.4 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.3.3 1
lineage5.2 2
lineage5.1.4 1
lineage3.1;lineage9 1
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 55
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR751326 Other lineage4.9 None
SRR25515471 Pre-XDR-TB lineage2.2.1 None
ERR323107 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR25534322 Pre-XDR-TB lineage2.2.1 None
SRR25515424 Pre-XDR-TB lineage2.2.1 None
ERR987722 MDR-TB None
ERR4797474 Other lineage4.9 None
ERR4798278 MDR-TB lineage3 in
ERR369157 Sensitive lineage4.9 None
ERR369151 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR4820224 Sensitive lineage3 None
SRR7535082 Other lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR124636 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR25534372 Pre-XDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28045479 Sensitive lineage3 None
SRR28351339 MDR-TB lineage4 None
ERR2510568 Pre-XDR-TB lineage3 pk
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR1172310 MDR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
SRR25515057 Pre-XDR-TB lineage2.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR25515458 Pre-XDR-TB lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR25515466 Pre-XDR-TB lineage2.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR4797184 HR-TB lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR12708416 Sensitive None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6358979 HR-TB lineage4.9 None
SRR25515457 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4872094 MDR-TB lineage5.2 None