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SRA data
Rv0005
- c.1917C>T
Drug resistance types
21 Sensitive
0 RR-TB
13 HR-TB
9 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
23
lineage2.2.1
9
lineage3
7
2
lineage5.2
2
lineage4.9;lineage9
2
La2;lineage4.9;lineage9
1
lineage4.3.2;lineage4.9
1
lineage4.1.2.1
1
lineage1.2.1.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
63
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063846
HR-TB
lineage4.9
None
ERR124636
Sensitive
lineage4.9
None
ERR13264927
Other
La1.2
None
ERR13265833
Other
lineage4.9
None
ERR161039
HR-TB
La3;lineage4.3.4
None
ERR176740
Other
lineage4.9
None
ERR2510568
Pre-XDR-TB
lineage3
pk
ERR2513283
Sensitive
lineage5.1.4
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
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