Rv1173 - c.939T>C


Drug resistance types
11 Sensitive 3 RR-TB 30 HR-TB 7 MDR-TB 1 Pre-XDR-TB 3 XDR-TB 27 Other
lineage Counts
lineage Count
lineage4.1.2.1 6
lineage4.9 20
lineage2.2.1.1 1
La1.2.BCG 1
lineage4.9;lineage7 3
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.3.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.1.2 1
lineage3.1.2.2 1
lineage3 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 3
La1.7.1;La1.7.X-unk4;lineage7 1
lineage6.1.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage5.2 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
La1.7;M.canetti;lineage4.9 3
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4 1
lineage1.1.3.1 1
La1.2 1
lineage2.2.1 1
lineage1.1.1 1
1
lineage2.1;lineage4.9;lineage7 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.9 2
spoligotype Counts
spoligotype Count
None 82
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6865721 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6045555 Other lineage4.9 None
ERR4178233 Sensitive lineage4.1.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9787153 Other lineage6.1.3 None
SRR29050859 Other lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR3797029 Other lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4812118 Sensitive lineage4.1.2.1 pe
ERR3283032 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4816478 HR-TB lineage4 None
ERR4816466 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR6198317 Other La1.2 None
SRR26399265 Other lineage2.2.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR987722 MDR-TB None
ERR6865383 Sensitive lineage4.1.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4811972 Sensitive lineage4.1.2.1 pe