Rv0668 - c.3384C>T
Drug resistance types
19 Sensitive
1 RR-TB
16 HR-TB
4 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 27 |
| lineage1.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.9 | 8 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29096107 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR29289391 | MDR-TB | lineage1.1.2 | None | ERR4816656 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4830353 | Other | La1.7 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675441 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR29096246 | Sensitive | La1.7;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR29097054 | Sensitive | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675222 | Other | La1.7 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR29097004 | Other | lineage3 | None | SRR29096425 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None |
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