lineage | Count |
---|---|
La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
lineage2.1;lineage4.1.1.1;lineage6.3 | 1 |
lineage2.1;lineage4.9 | 2 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2.1 | 1 |
M.canetti;lineage4.2 | 1 |
lineage4.9 | 3 |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
La2;lineage2.2 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.9 | 2 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
La1.7;lineage4.9 | 1 |
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
lineage3.1;lineage9 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.1.2 | 1 |
La3;M.canetti;lineage2.2.1 | 1 |
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage6.3 | 2 |
M.canetti;lineage2.1;lineage6.3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
1 | |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
La3;lineage2.1;lineage6.3 | 1 |
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
La2;lineage4.9 | 1 |
lineage2.2.1;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 49 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None |
SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None |
SRR1184380 | Other | lineage2.1;lineage4.9 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
SRR8380927 | Sensitive | lineage1.2.2.2 | in |
SRR1183144 | Other | lineage2.2.1 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
ERR3283018 | HR-TB | lineage4.9 | None |
ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None |
ERR1063839 | MDR-TB | La2;lineage2.2 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None |
ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
ERR176560 | HR-TB | La1.7;lineage4.9 | None |
SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
ERR3283042 | Other | lineage4.9 | None |
SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
SRR6832137 | Sensitive | lineage4.4.1.1 | None |
ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None |
SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
SRR26159043 | Other | lineage4.9 | None |
ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None |
ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None |
ERR234659 | Other | None | |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
SRR28119756 | Other | lineage4.9;lineage6.3 | None |
SRR5341333 | Other | lineage2.1;lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None |
ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
SRR28119811 | Other | lineage2.2.1;lineage6.3 | None |