Rv3457c - c.-431T>C


Drug resistance types
12 Sensitive 18 RR-TB 66 HR-TB 39 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 101 Other
lineage Counts
lineage Count
lineage4.9 59
lineage4.1.1.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.1 13
M.canetti;lineage4.2 1
La1.7;M.canetti;lineage4.9 5
M.canetti;lineage4.9 5
lineage5.1.4 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2 4
lineage4.4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
10
lineage3 4
lineage4.8 6
La1.7;lineage4.9 4
lineage2.1;lineage4.9 6
lineage2.2.1.1 5
lineage4.6.1.1 1
lineage2.1;lineage4.9;lineage6.3 3
La1.7;lineage3.1;lineage4 1
lineage4.2.2.2 1
lineage4.1.2.1 13
lineage4.5 2
lineage5.2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.3 2
lineage4.6.2.2 3
lineage4.3.2.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.1.2 2
lineage6.1.3 3
lineage4.2;lineage4.8.1;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.4.1.2 1
lineage4.1.1.1 1
lineage4.2;lineage4.9 3
lineage1.1.3.1 1
lineage3.1;lineage9 1
La1.2.BCG 1
La3;lineage4.8 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage1.1.2 1
M.canetti;lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.3.3;lineage4.3.4.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;lineage4.9 1
La1.2;La1.8.1 1
lineage6.3.1 2
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7 1
M.canetti;lineage2.1;lineage4.9 1
lineage1.1.1 1
La1;lineage4.9 1
lineage4.8;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
lineage2.2.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
La1.8.1 1
lineage4.4.1.1 1
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 240
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10808730 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1180172 RR-TB lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183144 RR-TB lineage2.2.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
DRR188519 Other lineage4.4.2 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR9786671 Other None
SRR1173363 Other None
SRR28044634 Other lineage3 None
ERR2514692 Other None
SRR1172857 Other None
ERR9786444 Sensitive lineage4.8 None
SRR3675441 RR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR5535933 Other lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4811031 Other lineage4.5 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR9786443 Sensitive lineage4.8 None
SRR1172951 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819877 HR-TB lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
SRR3675387 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR4818347 Other lineage4.1.2 None
ERR9787153 Other lineage6.1.3 None
SRR1196546 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR9786711 Other lineage4.6.2.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1023509 MDR-TB lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR4819422 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR1063896 HR-TB None
ERR9786604 Other None
ERR9787197 Other None
SRR1196768 MDR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR1196583 Other lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SAMN02585910 RR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR4817893 Other La3;lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4818929 HR-TB lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR20969731 Other lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR9786508 Sensitive lineage4.3.3;lineage4.3.4.1 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR9787169 Other lineage6.1.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173384 Other lineage4.9 None
ERR3804162 Sensitive lineage6.3.1 None
ERR4811030 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1181328 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3797043 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR12268442 Other lineage4.1.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR9787223 Sensitive lineage6.3.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4817731 HR-TB lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR133825 HR-TB La1;lineage4.9 None
SRR1175049 Other lineage4.8;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341299 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR7535086 Other None
ERR752229 Other lineage4.5 None
ERR1035157 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9786384 Sensitive lineage4.1.2.1 None
SRR18910194 HR-TB lineage2.2.2 None
ERR11465025 Other lineage4.1.1.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR26399239 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR1173778 Other lineage4.9 None
SRR7240476 Other La1.8.1 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323107 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR11466174 Other lineage4.8 None
SRR10809074 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4816656 Other lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None