Rv0006 - c.1818A>G


Drug resistance types
71 Sensitive 3 RR-TB 184 HR-TB 15 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 131 Other
lineage Counts
lineage Count
lineage6.3;lineage2.2.1 1
lineage4.3.3 2
lineage2.2.1 16
lineage4.9 34
lineage4.9;La3 1
lineage6.3;lineage4.9;lineage2.1 1
204
lineage3;lineage2.2.1 1
lineage4.1 2
lineage4.1.1 1
lineage4.3.4.2.1 3
lineage4.3.4 2
lineage2.1 2
lineage4 66
lineage4.1.2.1 12
lineage4.8 5
lineage4.4.1.1 2
lineage2.2 6
La1.8.1 1
lineage4.8;La3 2
lineage4.7 2
lineage4.2.1 1
lineage3 2
lineage3.1 4
lineage1.1 1
lineage5.2 2
La2 1
lineage4.4.1.2 1
lineage4.1.1.3 2
La1 2
lineage4.1.3 2
lineage4.6.2.2 3
lineage2 3
lineage4;lineage3.1 1
La1.2 1
lineage4.6.1.1 1
lineage4.9.1 1
lineage1.1.3.1 1
lineage4.3.2 2
lineage1.1.2 1
lineage6.1.3 1
lineage6 1
lineage6.3.1 1
lineage2.2.1.1 3
lineage4.3.4.1 1
lineage4.5 2
La1.7.1 1
lineage7;lineage2.2.1.2 1
lineage9;lineage3.1 1
spoligotype Counts
spoligotype Count
None 410
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR21732980 Other lineage4.3.3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR26399239 Sensitive lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR6325445 HR-TB None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR4815604 HR-TB None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR176779 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR3675502 Other None
ERR158583 HR-TB None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
SRR3675482 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
ERR161034 Other lineage4.3.4.2.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3416776 Other lineage2.1 None
SRR3675486 HR-TB None
ERR181744 HR-TB None
SRR3675209 Sensitive lineage4.9 None
ERR181824 HR-TB lineage4 None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
SRR3675234 Other None
SRR3675232 Other lineage4.1.2.1 None
SRR3675280 HR-TB lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675270 HR-TB None
SRR3675279 Other None
SRR3675292 Sensitive lineage4 None
SRR3675284 HR-TB lineage4.9 None
ERR181887 HR-TB None
ERR176643 HR-TB None
SRR3675383 HR-TB None
SRR3675311 Other None
ERR176651 HR-TB None
SRR3675387 Sensitive None
SRR3675456 HR-TB None
ERR176751 HR-TB None
ERR2229542 Other lineage4.8 None
SRR3675550 Other None
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
ERR212001 HR-TB None
SRR3675510 Other None
SRR3675522 Other None
SRR3675555 HR-TB None
ERR212034 HR-TB None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
SRR3675574 HR-TB None
SRR3675572 Other None
ERR212125 HR-TB lineage4 None
ERR212123 Other None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR212121 HR-TB None
ERR4816466 HR-TB None
ERR4817667 HR-TB lineage4.8 None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR4817735 Other lineage4.8 None
ERR4818615 Other None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
ERR4817893 Other lineage4.8;La3 None
ERR1035162 Other None
SRR5341432 HR-TB lineage4 None
SRR5007188 Other lineage4 None
SRR5341456 Other None
SRR5341418 Other None
SRR5341396 Other lineage4 None
ERR4820335 Other lineage4.1.2.1 None
SRR5341315 Sensitive None
ERR4819781 Other lineage2.2.1 None
SRR5341293 HR-TB lineage4 None
SRR5341302 HR-TB None
ERR2514821 Other lineage2.2.1 None
SRR5341313 HR-TB None
ERR4819932 Other lineage4.7 None
ERR2514692 Other None
SRR5341333 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR5341330 HR-TB None
SRR6045503 HR-TB None
ERR2693231 Other None
ERR2693239 HR-TB None
ERR2693257 Other None
ERR2693230 Other None
ERR2693254 Other None
SRR5535933 HR-TB None
SRR6045526 HR-TB None
SRR6046133 HR-TB None
SRR6045519 HR-TB None
ERR278594 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045555 HR-TB None
SRR6045952 HR-TB None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045892 Sensitive None
SRR6044790 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044918 Sensitive lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6046210 Other lineage4 None
SRR6045217 Other lineage4 None
SRR6045233 HR-TB None
SRR6046046 Other None
SRR6045327 HR-TB None
SRR6046066 HR-TB None
SRR6045399 Other None
SRR6045371 Sensitive lineage4.2.1 None
SRR6325444 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046225 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
ERR2851355 MDR-TB lineage3 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046362 HR-TB None
SRR6046482 HR-TB None
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046540 HR-TB None
SRR6046644 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6046824 HR-TB None
SRR6325447 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR4831117 HR-TB None
ERR323034 HR-TB lineage3.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR3077978 Other lineage1.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR6789626 Other None
ERR294248 HR-TB None
SRR6832787 RR-TB lineage2.2.1 None
ERR323036 HR-TB None
ERR502524 HR-TB La2 None
ERR5311090 HR-TB None
ERR502532 HR-TB None
ERR502889 Other None
ERR323038 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
SRR7496509 Other None
SRR7131023 Other lineage4.1.2.1 None
SRR8217918 HR-TB None
SRR7496471 Sensitive None
SRR7535086 Other None
SRR7496517 Other None
SRR7496523 Other lineage4.7 None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323045 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323063 HR-TB None
ERR323107 Other lineage4 None
ERR11465025 Other lineage4.1.1.3 None
ERR067699 HR-TB lineage4 None
ERR067681 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1034652 Other None
ERR133986 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063857 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR133825 Sensitive lineage4 None
ERR11465024 Other lineage4.1.1.3 None
ERR1063839 HR-TB lineage2.2 None
ERR1063862 HR-TB None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR3283010 Other La1 None
ERR323115 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR3283024 Other None
ERR3283021 HR-TB None
ERR3283032 HR-TB None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3468544 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283058 Other lineage4.9 None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3445504 HR-TB None
ERR3445503 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349265 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797043 HR-TB None
ERR373946 Sensitive lineage4 None
ERR3797017 Other None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797024 Other lineage4.9 None
ERR3797014 Other None
ERR3797046 HR-TB None
ERR403298 HR-TB lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797069 Other None
ERR3797083 HR-TB None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR3797036 HR-TB None
ERR3797044 Other None
ERR3797061 Other None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400336 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR5336148 Other None
ERR4188350 HR-TB None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178226 Sensitive lineage4 None
ERR4407463 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4796929 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4798262 HR-TB La1 None
ERR4797350 Sensitive lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR4798406 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4798431 HR-TB None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811105 HR-TB None
ERR12015083 Other lineage4.8;La3 None
ERR4811030 Sensitive None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4812155 Sensitive None
ERR4811493 HR-TB None
ERR4811142 MDR-TB None
ERR6866807 HR-TB lineage4 None
ERR6198317 Other La1.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358991 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR6866547 Sensitive lineage4 None
ERR6358837 HR-TB None
ERR6359045 HR-TB None
ERR6866410 Sensitive None
ERR736835 HR-TB None
ERR245758 Other lineage4.9.1 None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736874 HR-TB None
ERR736848 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736839 Other None
ERR736867 HR-TB None
ERR9117709 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9119669 HR-TB None
ERR9786440 Other lineage4.1 None
ERR9786604 Other None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786671 Other None
ERR9786645 Other lineage4.6.2.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR9786843 Other None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9787153 Other lineage6.1.3 None
ERR9787165 Other lineage6 None
ERR9787139 Other lineage6.3.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1173118 Other None
SRR1172728 MDR-TB None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1169194 Other None
SRR1172234 Other None
SRR1172817 HR-TB None
SRR1173384 Other lineage4 None
SRR1173363 HR-TB None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173400 Other None
SRR1175049 RR-TB None
SRR1173484 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1184024 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1175074 MDR-TB None
SRR1180147 Other lineage2.2.1.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1196474 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196494 MDR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1196546 HR-TB None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR13423544 Other lineage4.5 None
SRR16157123 Other lineage4.9 None
SRR15368973 Other None
SRR14782405 HR-TB None
SRR14801749 Sensitive None
SRR1710057 Other lineage2.1 None
SRR1640750 HR-TB None
SRR19303884 HR-TB None
SRR1792478 HR-TB La1.7.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18910194 HR-TB lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20969677 HR-TB lineage2 None
SRR19304036 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR25827682 Other None
SRR20970016 Other lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None