lineage | Count |
---|---|
44 | |
lineage4 | 26 |
lineage4.3.4.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.9 | 42 |
La1.7.X-unk4 | 1 |
lineage1.1.2 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2.1 | 5 |
lineage4.6.1.1 | 1 |
lineage4.5 | 1 |
lineage4.1.2.1 | 1 |
La3 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4.1 | 2 |
lineage9;lineage3.1 | 1 |
lineage3 | 1 |
La1.7.1 | 1 |
lineage2.1 | 1 |
lineage4.3 | 1 |
lineage5.1.4 | 1 |
lineage4.1.1.2 | 1 |
lineage4.8 | 1 |
lineage4.2.1 | 1 |
lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 142 |
ID | Drug resistance | Lineage | Country iso2 | ERR502889 | Other | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | SRR7535082 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4769521 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10808805 | Sensitive | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR17658565 | Other | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675502 | Other | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675279 | Other | None | SRR3675247 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675550 | Other | None | SRR3675522 | Other | None | SRR3675555 | HR-TB | None | ERR4816597 | Sensitive | None | ERR212138 | HR-TB | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341418 | Other | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045519 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6046245 | Other | lineage4.9 | None | ERR4830353 | Other | None |
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