Rv3793 - c.1716G>C


Drug resistance types
5 Sensitive 2 RR-TB 128 HR-TB 17 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 78 Other
lineage Counts
lineage Count
136
lineage4.5 1
lineage4.9;La1 1
lineage2.2 6
lineage9;lineage3.1 1
La1.2 1
lineage4.1 2
lineage4.3.4 1
lineage2.2.1 11
lineage4.1.1 1
lineage3;lineage2.1 1
lineage4.1.2.1 11
lineage4.9 12
lineage4 12
lineage4;lineage1.1 1
lineage4.8;La3 2
La1.8.1 1
lineage4.7 2
lineage1.1 1
lineage2.2.1.1 1
lineage5.2 2
lineage4.2.1 1
La2 1
lineage3.1 4
La1 2
lineage4.1.3 2
lineage2 2
lineage1.2.2.2 1
lineage3 2
lineage4.6.1.1 1
lineage4.3.2 1
lineage1.1.2 1
lineage4.3.4.1;lineage4.3.3 1
lineage4.8;lineage4.1 1
lineage4.8 1
lineage4.6.2.2 1
lineage6.3.1 1
lineage6 1
lineage4.4.1.1 1
lineage4.3.3 3
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 236
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR15368973 Other None
SRR18213713 HR-TB lineage4.5 None
SRR1640750 HR-TB None
SRR23961542 Other lineage4.9;La1 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20970016 Other lineage2.2 None
SRR18910194 HR-TB lineage2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
ERR4815604 HR-TB None
SRR23961549 Other La1.2 None
SRR3675464 HR-TB lineage4.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
SRR3675482 HR-TB None
ERR161033 HR-TB None
SRR3675236 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675486 HR-TB None
SRR3675270 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
SRR3675284 HR-TB lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
ERR176643 HR-TB None
SRR3675311 Other None
ERR176740 HR-TB None
SRR3675501 HR-TB None
SRR3675456 HR-TB None
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675545 HR-TB None
ERR4817060 RR-TB None
ERR212034 HR-TB None
SRR3675555 HR-TB None
ERR4816466 HR-TB None
SRR3675558 HR-TB None
ERR212123 Other None
SRR3675572 Other None
SRR3675574 HR-TB None
SRR3742665 HR-TB None
ERR4819322 Other lineage4;lineage1.1 None
ERR502912 Other lineage2.2.1 None
ERR4817893 Other lineage4.8;La3 None
SRR5007188 Other lineage4 None
ERR4816585 Other lineage2.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
ERR2514692 Other None
SRR5341418 Other None
ERR4819781 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR5535933 HR-TB None
SRR5341302 HR-TB None
ERR2514821 Other lineage2.2.1 None
ERR4819932 Other lineage4.7 None
SRR5341333 HR-TB None
ERR2693239 HR-TB None
SRR6045503 HR-TB None
SRR5341330 HR-TB None
SRR6045526 HR-TB None
SRR6045555 HR-TB None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6046133 HR-TB None
SRR6045217 Other lineage4 None
SRR6045053 Other None
SRR6045327 HR-TB None
SRR6046046 Other None
SRR6325444 HR-TB None
SRR6046066 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
ERR278594 HR-TB None
SRR6325442 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
ERR4830353 Other None
SRR6046514 HR-TB None
SRR6046482 HR-TB None
SRR6046460 HR-TB None
SRR6046540 HR-TB None
SRR6325447 HR-TB None
SRR6046644 HR-TB None
SRR6046737 Other lineage4.9 None
SRR6325448 HR-TB None
ERR3077978 Other lineage1.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046878 HR-TB lineage4 None
ERR323036 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6789626 Other None
SRR6785262 Sensitive lineage4.2.1 None
SRR6785413 Other lineage2.2.1 None
ERR294248 HR-TB None
ERR502524 HR-TB La2 None
ERR5311090 HR-TB None
ERR502532 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR5311099 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
ERR5311081 HR-TB None
SRR7496523 Other lineage4.7 None
SRR7496509 Other None
SRR7496517 Other None
ERR323041 HR-TB None
SRR7585435 Other lineage4.9 None
ERR323038 HR-TB None
ERR323063 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR323053 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323108 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR1034634 HR-TB None
ERR067699 HR-TB lineage4 None
ERR108471 HR-TB lineage4 None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283017 HR-TB None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797016 HR-TB None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3468544 HR-TB None
ERR3797069 Other None
ERR4188350 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR3804155 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769452 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769450 HR-TB None
ERR4798262 HR-TB La1 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR4799513 HR-TB lineage2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4800341 Other lineage3 None
ERR12015083 Other lineage4.8;La3 None
ERR4811105 HR-TB None
ERR4811022 HR-TB None
ERR4810741 HR-TB None
ERR736835 HR-TB None
ERR5336148 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR6358837 HR-TB None
ERR702406 HR-TB None
ERR4811142 MDR-TB None
ERR702404 HR-TB None
ERR9117709 HR-TB None
ERR736839 Other None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR8976043 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
ERR9786440 Other lineage4.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786508 Sensitive lineage4.3.4.1;lineage4.3.3 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786694 Other lineage4.1.2.1 None
SRR1172728 MDR-TB None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR1169194 Other None
ERR9787165 Other lineage6 None
SRR1172234 Other None
SRR1173118 Other None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173400 Other None
SRR1173384 Other lineage4 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173484 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173629 Other None
SRR1175049 RR-TB None
SRR1173778 Other None
SRR1174897 HR-TB None
SRR1173788 Other None
SRR1180137 Other lineage2.2.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1184294 HR-TB None
SRR1184381 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR12416840 MDR-TB lineage4.9 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12142341 HR-TB None
SRR14782405 HR-TB None
SRR12416824 HR-TB None