Rv0668 - c.1380G>C
Drug resistance types
16 Sensitive
17 RR-TB
22 HR-TB
10 MDR-TB
5 Pre-XDR-TB
2 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 26 |
| lineage4.7 | 1 |
| La2;M.canetti | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.6.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage4.8 | 10 |
| La1.6;La3;lineage4.9 | 2 |
| lineage3 | 6 |
| M.canetti;lineage4.9 | 3 |
| lineage2.2.1 | 14 |
| lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.3 | 1 |
| La1.8.1 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage1.1.1 | 1 |
| 2 | |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.2.BCG | 1 |
| lineage3.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage6.1.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 111 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6045555 | Other | lineage4.9 | None |
| SRR7496523 | Other | lineage4.7 | None |
| ERR4817915 | Other | lineage4.9 | None |
| ERR266126 | Sensitive | La2;M.canetti | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| ERR6358755 | Other | lineage4.6.1.1 | None |
| ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None |
| ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
| ERR751345 | Other | lineage5.1.1 | None |
| SAMEA3501073 | RR-TB | lineage4.8 | None |
| ERR3797061 | Other | La1.6;La3;lineage4.9 | None |
| SRR17658565 | Pre-XDR-TB | lineage3 | None |
| ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
| SRR13423649 | Sensitive | lineage2.2.1 | None |
| SRR6045219 | HR-TB | lineage4.9 | None |
| ERR4816852 | Other | lineage4.9 | None |
| SRR7496471 | Sensitive | lineage4 | None |
| SRR16157123 | Other | lineage4.9 | None |
| ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
| SRR6044942 | HR-TB | lineage4.9 | None |
| ERR4769436 | Other | La1.3 | None |
| ERR3439489 | RR-TB | La1.8.1 | None |
| SRR6046594 | Sensitive | lineage4.9 | None |
| SRR11342634 | MDR-TB | lineage4.8 | None |
| SRR16156697 | RR-TB | lineage2.2.1 | None |
| SRR9971113 | Other | lineage2.2.1 | None |
| ERR502470 | RR-TB | lineage4.9 | None |
| ERR2432997 | Other | lineage4.8 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR9971112 | Other | lineage2.2.1 | None |
| SRR10315551 | Sensitive | lineage2.2.1 | None |
| SRR6046485 | Other | lineage4.9 | None |
| ERR3283006 | RR-TB | lineage4.9 | None |
| SRR6045233 | Other | M.canetti;lineage4.9 | None |
| ERR4800527 | MDR-TB | lineage2.2.1 | None |
| ERR9786528 | Sensitive | lineage4.6.2.2 | None |
| SRR14066533 | Sensitive | lineage1.1.1 | None |
| SRR20632814 | Sensitive | lineage4.9 | None |
| ERR987722 | MDR-TB | None | |
| SRR5341365 | Pre-XDR-TB | lineage3 | None |
| ERR3801503 | Sensitive | lineage4.6.2.2 | None |
| SRR17567917 | RR-TB | lineage4.4.1.1 | None |
| SRR9971270 | RR-TB | lineage2.2.1 | None |
| ERR323044 | HR-TB | lineage4.3.4.2.1 | None |
| ERR4769417 | Pre-XDR-TB | lineage4.9 | None |
| ERR4815079 | RR-TB | lineage3 | None |
| SRR6046839 | Other | lineage4.9 | None |
| SRR6045191 | Sensitive | lineage4.9 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None |
| ERR2693254 | Other | La1.6;La3;lineage4.9 | None |
| SRR11972417 | MDR-TB | lineage2.2.1 | None |
| SRR29050859 | Other | lineage4.9 | None |
| SRR10315567 | HR-TB | lineage2.2.1 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR978767 | RR-TB | lineage4.8 | None |
| SRR7535086 | Other | None | |
| ERR978766 | RR-TB | lineage4.8 | None |
| ERR9786711 | Sensitive | lineage4.6.2.2 | None |
| ERR3797062 | RR-TB | lineage4.9 | None |
| SRR6044835 | Other | lineage4.9 | None |
| ERR3283018 | HR-TB | lineage4.9 | None |
| ERR4816151 | Sensitive | lineage4.8 | None |
| ERR4798262 | HR-TB | La1.2.BCG | None |
| ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| SRR1173310 | Other | lineage3.1.1 | None |
| ERR3283042 | Other | lineage4.9 | None |
| ERR4816322 | Other | lineage4.9 | None |
| SRR14782539 | MDR-TB | lineage4.2.1 | None |
| SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
| SRR2101471 | Sensitive | lineage4.4.1.1 | None |
| ERR4808964 | RR-TB | lineage2.2.1 | None |
| SRR6896383 | Sensitive | lineage4.4.1.1 | None |
| SRR9971114 | Other | lineage2.2.1 | None |
| ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR978765 | RR-TB | lineage4.8 | None |
| ERR2514327 | HR-TB | lineage4.8 | None |
| ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None |
| ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None |
| ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR1792478 | HR-TB | La1.7.1 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| ERR2513259 | Other | lineage3 | None |
| SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
| ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
| SRR6046133 | HR-TB | lineage4.9 | None |
| SRR11342660 | MDR-TB | lineage2.2.1 | None |
| ERR4816470 | HR-TB | lineage3 | None |
| ERR4797588 | MDR-TB | lineage3 | None |
| ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None |
| ERR3797043 | Sensitive | lineage4.9 | None |
| ERR266120 | Sensitive | M.canetti | None |
| ERR3283032 | Other | lineage4.9 | None |
| ERR4816466 | HR-TB | lineage4.9 | None |
| ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
| SRR7236330 | Other | La1.8.1 | None |
| SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
| SRR9971065 | RR-TB | lineage2.2.1 | None |
| ERR9787153 | Other | lineage6.1.3 | None |
| ERR176740 | Other | lineage4.9 | None |
| SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| ERR9992784 | XDR-TB | lineage2.2.2 | None |
| ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None |
| SRR9971046 | MDR-TB | lineage4.8 | None |
| SRR10808730 | Other | lineage4.9 | None |
