lineage | Count |
---|---|
36 | |
lineage4 | 51 |
lineage4.9 | 6 |
lineage4;lineage3.1 | 1 |
La1.2 | 2 |
lineage4.1.2.1 | 4 |
lineage3.1.2 | 1 |
lineage3 | 2 |
lineage2.2 | 3 |
La3 | 1 |
lineage1.1.1 | 1 |
La1.8.1 | 1 |
lineage4.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.3 | 1 |
lineage2.1 | 1 |
lineage4.8 | 1 |
lineage4.2.1 | 1 |
lineage2.2.1 | 4 |
La2 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 123 |
ID | Drug resistance | Lineage | Country iso2 | ERR323053 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR323115 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4024991 | Other | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866639 | Other | None | ERR987722 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9634265 | Sensitive | None | SRR1167384 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1173777 | Other | lineage4 | None | SRR1174897 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR17658565 | Other | lineage3 | None | SRR1791747 | Other | La1.8.1 | None | SRR18911554 | Other | lineage4.1.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR23961549 | Other | La1.2 | None | ERR176568 | Other | lineage4.3 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675265 | Other | lineage4 | None | ERR212033 | HR-TB | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212034 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | SRR6325444 | HR-TB | None | ERR1035138 | MDR-TB | None | SRR5341330 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6325448 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR323039 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None |
---|