Rv0006 - c.1066C>T
Drug resistance types
2 Sensitive
0 RR-TB
17 HR-TB
1 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| 9 | |
| lineage2.1;lineage4.9 | 9 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.9 | 19 |
| lineage2.2.1 | 5 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 6 |
| lineage2.2.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| lineage4.7 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4815604 | Other | None | ERR181887 | Other | lineage4.9 | None | ERR4816999 | Other | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR9117709 | Other | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786671 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR6046066 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR176651 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR3675275 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR3675236 | Other | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4800341 | Other | lineage3 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR3675221 | Other | lineage4.9 | None | ERR9787197 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786604 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
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