Rv0006 - c.2022C>A
Drug resistance types
1 Sensitive
1 RR-TB
6 HR-TB
1 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage4.9 | 3 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| 2 | |
| lineage2.1;lineage4.9 | 1 |
| lineage2.1 | 2 |
| lineage2.2.1 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.1.3 | 1 |
| lineage2.2.2;lineage4 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.2 | 1 |
| La3 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 25 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR29016780 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1175074 | Other | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1184372 | MDR-TB | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1172728 | RR-TB | La3 | None | SRR1172817 | Other | La3 | None |
|---|
