lineage | Count |
---|---|
lineage4.9;lineage6.1.3 | 1 |
La1.7;M.canetti;lineage4.9 | 2 |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
lineage2.2.1 | 4 |
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
lineage2.2 | 2 |
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.9 | 2 |
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
lineage3.1;lineage9 | 1 |
spoligotype | Count |
---|---|
None | 26 |
ID | Drug resistance | Lineage | Country iso2 | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR5341456 | Other | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None |
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