Rv2477c - c.1095A>G


Drug resistance types
24 Sensitive 3 RR-TB 72 HR-TB 31 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 130 Other
lineage Counts
lineage Count
lineage4.9 66
lineage3 2
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 2
lineage1.1.3.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9 14
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2 2
lineage4.4.1.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage4.1.2.1 15
lineage4.2;lineage4.9 2
La1.7;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
16
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.9 2
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.3 3
M.canetti;lineage4.6.4;lineage4.9 1
lineage3.1.2.1;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage3.1;lineage9 1
lineage2.2.1 10
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage6.3 2
lineage4.6.3;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4 4
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage4.8.1 1
lineage2.1 2
M.canetti;lineage4.2 1
lineage2.2.1.1 1
La1.2.BCG 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage7 1
lineage4.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
La3;lineage4.9 3
lineage4.8 3
lineage4.6.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.8 2
lineage6.3.1 1
lineage1.1.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.7 1
La3;lineage1.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
M.canetti;lineage2.2 1
lineage4.1.1.3 1
lineage1;lineage4.9 1
La1.2;La1.8.1 1
lineage4.1.1.1 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.2 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.6.2.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.1.3 1
lineage4.4.1.1.1 1
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.1 1
lineage4.2.2.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1.7.1;lineage4.9 1
lineage1.1.3.2 1
spoligotype Counts
spoligotype Count
None 264
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4817731 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR28119752 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR6785267 Other lineage2.2.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6789626 Other None
SRR5341330 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR971389 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR9117709 Other None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR473332 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR779852 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR212001 HR-TB None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6044815 Other lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR3675572 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818615 Sensitive None
SRR3675232 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181744 HR-TB La3;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502511 Sensitive lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6045548 Sensitive lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4799025 Other lineage4.8 None
SRR6045526 Other lineage4.9 None
ERR4815604 Other None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR29050859 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4820854 Other lineage4.1.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR3283044 Other lineage4 None
SRR7535086 Other None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR12416842 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR28119827 Other La3;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
ERR12015083 Other La3;lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045892 Sensitive lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4817060 Other None
ERR4814352 Other lineage2.2.1 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR21690574 Other lineage4.1.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR9786604 Other None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6785413 Other lineage2.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR702405 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816585 Other lineage2.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4814734 Other lineage1.2.1.1 None
ERR4820335 Other lineage4.1.2.1 None
ERR1035157 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR4816999 Other None
ERR2513470 Other lineage4.2.2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR3273109 HR-TB lineage4 None
ERR176779 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None