Rv1173 - c.2112A>G
Drug resistance types
32 Sensitive
3 RR-TB
132 HR-TB
14 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
106 Other
lineage Counts
| lineage | Count |
|---|---|
| 159 | |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4 | 35 |
| lineage4.4.1.2 | 1 |
| lineage4.9 | 17 |
| lineage4.1.3 | 2 |
| lineage4.1.2.1 | 7 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 3 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
| lineage3 | 5 |
| lineage4.8;La3 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 6 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.8;lineage4.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.8 | 3 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| La3 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1 | 17 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 295 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323038 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7535086 | Other | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1035157 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR1035122 | Sensitive | None | ERR323107 | Other | lineage4 | None | ERR1034652 | Other | None | ERR3283024 | Other | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3439432 | Other | None | ERR3283051 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797016 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797061 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4797264 | Sensitive | None | ERR473332 | Other | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4811105 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4810741 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866639 | Other | None | ERR5336148 | Other | None | ERR6358979 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736874 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR9786604 | Other | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9896144 | Other | lineage3 | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR987722 | HR-TB | None | ERR990545 | Other | lineage3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172951 | Other | None | SRR1169306 | Other | None | SRR1172310 | HR-TB | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173118 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1174897 | HR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1184294 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196566 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR14801749 | Sensitive | None | SRR20969677 | HR-TB | lineage2 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR161033 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR181887 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR2229542 | Other | lineage4.8 | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212034 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR502912 | Other | lineage2.2.1 | None | ERR2229511 | Sensitive | lineage4.8 | None | SRR7496472 | Other | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818021 | Other | La1.8.1 | None | SRR5341453 | Sensitive | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5007188 | Other | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341303 | RR-TB | lineage4 | None | ERR2693231 | Other | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046133 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | ERR4830353 | Other | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR5311081 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502532 | HR-TB | None | SRR6789626 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7496509 | Other | None | SRR7496517 | Other | None |
|---|
