lineage | Count |
---|---|
43 | |
lineage4 | 17 |
lineage4.3.4 | 1 |
lineage4.9 | 10 |
lineage4.2.1.1 | 1 |
La2 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.2 | 1 |
lineage3.1.2 | 1 |
lineage9;lineage3.1 | 1 |
lineage2.2.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | ERR158583 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675502 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | ERR212123 | Other | None | SRR5341418 | Other | None | ERR1035162 | Other | None | ERR4819051 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341470 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045399 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR323039 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1034634 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR7801181 | Sensitive | lineage4.3.4.2 | None | ERR4797474 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR4798099 | Other | None | ERR4798406 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811493 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR14782405 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None |
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