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SRA data
Rv0006
- c.2256G>C
Drug resistance types
56 Sensitive
11 RR-TB
69 HR-TB
266 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
18 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.1.3
384
lineage4.9
3
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
3
M.canetti;lineage2.1;lineage4.9
3
lineage4.1.3;lineage5.1.1
2
lineage1.1.2
2
lineage4.1.3;lineage6.3.1
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La3;M.canetti;lineage2.1;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
442
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR028357
HR-TB
lineage4.1.3
None
ERR028365
Sensitive
lineage4.1.3
None
ERR047882
MDR-TB
lineage4.1.3
None
ERR047885
MDR-TB
lineage4.1.3
gb
ERR047887
MDR-TB
lineage4.1.3
None
ERR047888
MDR-TB
lineage4.1.3
None
ERR047889
MDR-TB
lineage4.1.3
None
ERR047890
MDR-TB
lineage4.1.3
None
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
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