SRR998766
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4828894
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423547
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
SRR3724791
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
SRR16370456
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679313
|
Sensitive
|
lineage4.1.3
|
None
|
SRR11444031
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4423554
|
RR-TB
|
lineage4.1.3
|
None
|
ERR4423598
|
HR-TB
|
lineage4.1.3
|
None
|
SAMN02231154
|
Pre-XDR-TB
|
lineage4.1.3
|
ml
|
ERR2679315
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1577811
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516850
|
MDR-TB
|
lineage4.1.3
|
gb
|
SRR1103381
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11068129
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3724819
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516255
|
MDR-TB
|
lineage4.1.3
|
be
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR998798
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998835
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998831
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998841
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11082135
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1162694
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1049963
|
RR-TB
|
lineage4.1.3
|
None
|
SRR11444164
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1145859
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR1952138
|
MDR-TB
|
lineage4.1.3
|
ie
|
ERR4821128
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998750
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998785
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724965
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR11082331
|
HR-TB
|
lineage4.1.3
|
None
|
SRR21675940
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
SRR998839
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR998765
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4423558
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR998811
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444089
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998810
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516344
|
MDR-TB
|
lineage4.1.3
|
be
|
SRR998751
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998801
|
MDR-TB
|
lineage4.1.3;lineage4.6.2.2
|
None
|
ERR9786910
|
HR-TB
|
lineage4.1.3
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR998768
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680025
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231160
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998784
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR12554784
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774125
|
HR-TB
|
lineage4.1.3
|
None
|
SRR11444384
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998773
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998793
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998816
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998802
|
MDR-TB
|
lineage4.1.3;lineage5.1.1
|
None
|
SRR998838
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11067910
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29053196
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3725722
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR4423591
|
Other
|
lineage4.1.3
|
None
|
ERR10680040
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444403
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231183
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724662
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998730
|
Sensitive
|
lineage4.1.3
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR3806848
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4407537
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998797
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR047887
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11050363
|
Sensitive
|
lineage4.1.3
|
None
|
SRR3725703
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998756
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11067446
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3725718
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR2679259
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998799
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998815
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21690384
|
Other
|
lineage4.1.3
|
None
|
SAMN02231173
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444341
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1162475
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR16370440
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679284
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516714
|
MDR-TB
|
lineage4.1.3
|
nl
|
ERR2516657
|
Pre-XDR-TB
|
lineage4.1.3
|
nl
|
ERR4423770
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786998
|
HR-TB
|
lineage4.1.3
|
None
|
SRR023476
|
HR-TB
|
lineage4.1.3
|
None
|
SRR29126974
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998786
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11082308
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3725693
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR047888
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998844
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5535774
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724971
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517794
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR4829980
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3732698
|
Sensitive
|
lineage4.1.3
|
ci
|
SRR5535723
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6511614
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR047882
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1103500
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998769
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4872136
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR502504
|
HR-TB
|
lineage4.1.3;lineage6.2.1
|
None
|
SRR998814
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR998698
|
HR-TB
|
lineage4.1.3;lineage4.6.2.2
|
None
|
SRR998823
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998842
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423523
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR5535684
|
HR-TB
|
lineage4.1.3
|
None
|
ERR10680193
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231180
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998787
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR26112285
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1049966
|
Sensitive
|
lineage4.1.3
|
None
|
ERR047890
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13284011
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444241
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2679247
|
RR-TB
|
lineage4.1.3
|
None
|
ERR4423539
|
HR-TB
|
lineage4.1.3
|
None
|
SRR29126625
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21727727
|
Other
|
lineage4.1.3
|
None
|
SRR7517789
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998736
|
Sensitive
|
lineage4.1.3
|
None
|
ERR234201
|
HR-TB
|
lineage4.1.3
|
gh
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR4423599
|
HR-TB
|
lineage4.1.3
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR2100065
|
HR-TB
|
lineage4.1.3
|
None
|
SRR11444304
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR3732646
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13284399
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11082803
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4829008
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4829014
|
MDR-TB
|
lineage4.1.3
|
it
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR11443991
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444288
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1162763
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423596
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1103486
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13270283
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2864270
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3725708
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998794
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998795
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1145851
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444260
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR998770
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998749
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998679
|
RR-TB
|
lineage4.1.3
|
None
|
SRR998752
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724802
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4821432
|
HR-TB
|
lineage1.1.3.1;lineage4.1.3
|
None
|
ERR9119506
|
RR-TB
|
lineage4.1.3
|
None
|
ERR11067818
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444380
|
Sensitive
|
lineage4.1.3
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR1162480
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR550698
|
HR-TB
|
lineage4.1.3
|
de
|
ERR10680159
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577829
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5535687
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7781503
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4822280
|
Other
|
lineage4.1.3
|
None
|
SRR998830
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR9030305
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9119616
|
RR-TB
|
lineage4.1.3
|
None
|
ERR8774127
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998846
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998729
|
Sensitive
|
lineage4.1.3
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR998759
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423769
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231148
|
Sensitive
|
lineage4.1.3
|
None
|
SRR7517808
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR047889
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679273
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4872137
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998764
|
HR-TB
|
lineage4.1.3
|
None
|
SAMN02231172
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5535708
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9030410
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423636
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11043448
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11043475
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11049437
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4195318
|
Sensitive
|
lineage1.1.2
|
None
|
ERR552467
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774490
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR234198
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998829
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444317
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1162468
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
SRR998731
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231145
|
Sensitive
|
lineage4.1.3
|
ml
|
ERR4817581
|
HR-TB
|
lineage4.1.3
|
gb
|
SRR7069949
|
HR-TB
|
lineage4.1.3
|
None
|
ERR10680222
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11080823
|
Sensitive
|
lineage4.1.3
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR998837
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11081053
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998832
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21689723
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4423557
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SAMN02231155
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231185
|
MDR-TB
|
lineage4.1.3
|
ml
|
SAMN02231187
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4818662
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998755
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9901818
|
HR-TB
|
lineage4.1.3
|
None
|
SRR7781511
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577824
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680118
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
ERR2679269
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998796
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998742
|
MDR-TB
|
lineage4.1.3;lineage6.3.1
|
None
|
SRR998767
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998758
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998809
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998833
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998845
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11049264
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4872100
|
RR-TB
|
lineage4.1.3
|
None
|
ERR4423595
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9899670
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2200071
|
HR-TB
|
lineage4.1.3
|
de
|
SAMN02231159
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21710726
|
HR-TB
|
lineage4.1.3
|
None
|
SRR18913757
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231161
|
Pre-XDR-TB
|
lineage4.1.3
|
ml
|
ERR4821488
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998739
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2679308
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1049972
|
MDR-TB
|
lineage4.1.3
|
ml
|
SRR23252658
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2513998
|
HR-TB
|
lineage4.1.3
|
gb
|
ERR9786979
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231164
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998754
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998812
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552432
|
MDR-TB
|
lineage4.1.3
|
cg
|
SRR1162773
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR1162482
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1162775
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7517792
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998822
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998847
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231190
|
MDR-TB
|
lineage4.1.3
|
ml
|
ERR2516542
|
MDR-TB
|
lineage4.1.3
|
nl
|
ERR2516606
|
MDR-TB
|
lineage4.1.3
|
nl
|
SRR998744
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29906762
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR10680158
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1145855
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11082415
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231175
|
MDR-TB
|
lineage4.1.3
|
ml
|
SRR11444129
|
Sensitive
|
lineage4.1.3
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR998792
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998813
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231181
|
MDR-TB
|
lineage4.1.3
|
ml
|
SRR7517790
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR7517793
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR11067754
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998747
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998771
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11049741
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998821
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
SRR026443
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR2679262
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679263
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4817479
|
Other
|
lineage4.1.3
|
None
|
SRR998738
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9121250
|
Sensitive
|
lineage1.1.2
|
None
|
ERR13292093
|
HR-TB
|
lineage4.1.3
|
None
|
ERR10680078
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4815780
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4819728
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4828916
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR553332
|
HR-TB
|
lineage4.1.3
|
de
|
SRR1049975
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1049967
|
Sensitive
|
lineage4.1.3
|
ml
|
ERR10680036
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29055889
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4828982
|
MDR-TB
|
lineage4.1.3
|
it
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR11082668
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR11082587
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4829435
|
MDR-TB
|
lineage4.1.3
|
it
|
ERR10680106
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577823
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517733
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724928
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4872222
|
RR-TB
|
lineage4.1.3
|
None
|
SRR3724803
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR11043574
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998735
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11050442
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998843
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423540
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3725712
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR16058495
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2679268
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517807
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13194027
|
Sensitive
|
lineage2.2.2
|
None
|
ERR4423548
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998757
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11461690
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552858
|
HR-TB
|
lineage4.1.3
|
de
|
ERR13285117
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11461699
|
Sensitive
|
lineage4.1.3
|
None
|
SRR3732647
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998728
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998753
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4821377
|
HR-TB
|
lineage4.1.3
|
gb
|
SRR998745
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5535691
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998748
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998834
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11049061
|
Other
|
lineage4.1.3
|
None
|
SRR3724807
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR9901095
|
HR-TB
|
lineage4.1.3
|
None
|
SRR11444383
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998741
|
MDR-TB
|
lineage4.1.3;lineage6.3.1
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR29055892
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423484
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1103621
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR16100243
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2516489
|
MDR-TB
|
lineage4.1.3
|
nl
|
SRR998824
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998733
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1049970
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR4423489
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR8774492
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR13291810
|
HR-TB
|
lineage4.1.3
|
None
|
SAMN02231153
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR10680022
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998848
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444211
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998836
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2514497
|
Sensitive
|
lineage4.1.3
|
gb
|
ERR4816120
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444081
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231156
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231186
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4829691
|
MDR-TB
|
lineage4.1.3
|
it
|
ERR4423584
|
Sensitive
|
lineage4.1.3
|
None
|
ERR552466
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998746
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
SAMN02231179
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998732
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2514564
|
HR-TB
|
lineage4.1.3
|
gb
|
ERR2679314
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9124956
|
HR-TB
|
lineage4.1.3
|
None
|
ERR028357
|
HR-TB
|
lineage4.1.3
|
None
|
ERR028365
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774231
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR3725719
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR4818816
|
MDR-TB
|
lineage4.1.3
|
gb
|
SRR29126694
|
HR-TB
|
lineage4.1.3
|
None
|
ERR047885
|
MDR-TB
|
lineage4.1.3
|
gb
|
SRR1049968
|
Pre-XDR-TB
|
lineage4.1.3
|
ml
|
ERR13284972
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998774
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998734
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998803
|
MDR-TB
|
lineage4.1.3;lineage5.1.1
|
None
|
SRR7517788
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR3724956
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517681
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998840
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552431
|
MDR-TB
|
lineage4.1.3
|
cg
|
ERR13284737
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577821
|
MDR-TB
|
lineage4.1.3
|
None
|