Rv0701 - c.-47T>G


Drug resistance types
78 Sensitive 6 RR-TB 77 HR-TB 13 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 75 Other
lineage Counts
lineage Count
lineage4.9 147
lineage4.3.4.2 1
lineage2.2 4
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2.1.1 2
3
La1.7;lineage4.9 5
lineage3 3
lineage4.1.1.3;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
lineage2.2.1 12
lineage3.1;lineage9 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 1
M.canetti;lineage4.9;lineage9 1
La2;lineage2.2 1
lineage2.2.1;lineage4 1
La1.7;lineage4.9;lineage7 3
lineage4.8 2
lineage4.4 1
lineage4 5
La3;lineage4.3.4 1
M.canetti;lineage1 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage4.3.4.2.1 1
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage4.9;lineage7 3
La3;lineage4.9 6
lineage1.1.1;lineage4 1
lineage4.8;lineage4.9 2
La1.6;lineage4 1
lineage1;lineage4.9 2
La1.7;lineage4.9;lineage6 1
lineage4.5 2
lineage4.3.4 1
La1.7.1 1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
La2;lineage4.9 2
lineage6.1.3 1
M.canetti;lineage4.9 1
La1.2;La1.8.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 3
lineage4.3.2.1 1
La1;lineage4.9 1
lineage4.3.4.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.2.BCG 1
lineage4.2;lineage4.9 2
lineage4.3.2;lineage4.9 1
La1.8.1 1
lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.1;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.7.X-unk4;lineage4.9 1
lineage1.1.2 1
lineage2.1;lineage4.9 1
lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 256
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR400336 Sensitive lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR4799513 HR-TB lineage2.2 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR12708416 Sensitive None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR5341299 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341387 Other lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6045795 Sensitive lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR137286 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR473323 HR-TB lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046046 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4798099 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR11662694 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR5341461 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR181824 HR-TB lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR1159378 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR363474 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR6359074 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
ERR751326 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341308 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR987722 MDR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR6046878 Other lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4798823 HR-TB lineage4 None
ERR926157 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR323066 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR387051 Other lineage4.9 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR1063855 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None