lineage | Count |
---|---|
lineage4.5 | 2 |
92 | |
lineage9;lineage3.1 | 1 |
lineage2 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3.4 | 2 |
lineage4 | 6 |
lineage4.8 | 1 |
lineage2.2.1 | 4 |
lineage4.9 | 6 |
lineage2.2 | 2 |
La1.2 | 2 |
spoligotype | Count |
---|---|
None | 120 |
ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | ERR158583 | HR-TB | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR25827682 | Other | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR181744 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675221 | HR-TB | None | SRR3675501 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675545 | HR-TB | None | ERR234659 | HR-TB | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212123 | Other | None | ERR1035162 | Other | None | SRR5341418 | Other | None | SRR5341456 | Other | None | ERR2693239 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | Other | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045399 | Other | None | ERR278594 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045053 | Other | None | SRR6046066 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR323038 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502889 | Other | None | ERR5311081 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323063 | HR-TB | None | ERR1063862 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3439432 | Other | None | ERR133986 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797069 | Other | None | ERR3797046 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR5336148 | Other | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR4769421 | Other | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811493 | HR-TB | None | ERR736839 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786843 | Other | None | ERR8976043 | HR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12416824 | HR-TB | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None |
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