Rv0006 - p.Cys561Ser

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
12 Sensitive 4 RR-TB 23 HR-TB 6 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 24 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9 1
lineage2.2.1 9
M.canetti;lineage4.9 3
La3;lineage4.9 5
lineage4.9;lineage9 2
lineage4.9 22
lineage3.1.2.2 1
lineage4.8 1
3
lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage6.1.1 2
lineage4.9.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage3.1.2.1 1
lineage1.1.1 1
lineage2.2.1.1 2
lineage2.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.6.3;lineage4.9 1
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 70
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR9786444 Sensitive lineage4.8 None
SRR10315551 Sensitive lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR1183144 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1169306 Other La3;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR245758 Other lineage4.9.1 None
ERR6358991 HR-TB None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR987729 HR-TB lineage3.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR29097066 Sensitive lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR29050770 Sensitive lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR9787014 Other lineage6.1.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR29097037 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4796577 HR-TB None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None