Rv1854c - c.171A>G


Drug resistance types
5 Sensitive 0 RR-TB 43 HR-TB 6 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 28 Other
lineage Counts
lineage Count
1
lineage3.1;lineage9 1
La1.7;lineage4.9 3
La3;lineage2 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage4.9 3
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 5
lineage2.2.1;lineage6.3 1
lineage4.9 15
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1 2
lineage4.1.3 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.1.1 1
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage4 1
La1.2.BCG 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 83
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4407463 HR-TB None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR29096150 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4817731 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR779852 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28239575 Sensitive lineage4.1.2.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR387051 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5535933 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816478 HR-TB lineage4 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None