Rv3244c - c.1545T>G
Drug resistance types
5 Sensitive
3 RR-TB
20 HR-TB
10 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;lineage4.3.4 | 1 |
| La1.7;lineage4.9 | 2 |
| 2 | |
| lineage3.1;lineage9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| La3;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341453 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR1173778 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11050571 | Other | La1.4 | None | ERR4815441 | HR-TB | lineage4.9 | None |
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