Rv3596c - c.2103G>C


Drug resistance types
45 Sensitive 8 RR-TB 43 HR-TB 23 MDR-TB 2 Pre-XDR-TB 1 XDR-TB 65 Other
lineage Counts
lineage Count
lineage4.2.1.1;lineage4.3.3 1
lineage4.9 84
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 9
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4 3
lineage4.3.1;lineage4.9;lineage6 1
lineage1.1.2 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage6.1.3 1
La1.2;La1.8.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage1 1
lineage4.9;lineage9 1
La1;lineage4.9 3
lineage4.1.2.1 3
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2 4
lineage6.1.2 1
M.canetti;lineage4.2 1
lineage2.2.1;lineage4 2
lineage4.9;lineage7 2
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage2.1 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage1.1.1 1
lineage4.3.3 1
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1 1
lineage4.1.2 1
La1.8.1 1
lineage4.8 5
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4.2.1 3
lineage4.1.1.2 1
La1;lineage2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La3;lineage4.9 1
lineage4.1.1.3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.6.2.2 1
lineage2.1;lineage4.9;lineage6.3 1
lineage3.1;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage2.1;lineage4.9 1
La2;lineage4.9 1
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.1.2 1
lineage3.1 1
lineage2.2.1.1 1
lineage4.8;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
spoligotype Counts
spoligotype Count
None 187
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6044875 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1159378 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR363506 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR10808805 Other La1;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR736834 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR28351342 HR-TB lineage2.2.1;lineage4 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR3283055 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR137286 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323066 Sensitive lineage4.9 None
DRR261137 Other lineage1.1.1 None
ERR4811030 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063896 Sensitive None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR12015086 RR-TB lineage4.8 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675235 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR12015085 Other lineage4.8 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341308 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4797264 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR5341387 Other lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6045217 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1158918 Sensitive lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5535933 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046046 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR3273109 HR-TB lineage4 None
ERR108471 HR-TB lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR28351442 HR-TB lineage3.1 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR12015084 Other lineage4.8 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None