Rv3596c - c.2103G>C
Drug resistance types
88 Sensitive
5 RR-TB
62 HR-TB
10 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| 58 | |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4 | 74 |
| lineage4.9 | 38 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.8 | 6 |
| lineage4.1.1.2 | 1 |
| lineage3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 14 |
| La1.8.1 | 2 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2 | 7 |
| La1.2 | 1 |
| lineage6 | 1 |
| lineage4.5 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 233 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR158583 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675279 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675502 | Other | None | SRR3675550 | Other | None | SRR3675522 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4817998 | Other | lineage3 | None | SRR5341387 | Other | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341375 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341418 | Other | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR1023509 | Other | None | SRR5341330 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341456 | Other | None | SRR5341467 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5431730 | Other | La1.8.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046362 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6511621 | HR-TB | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR502889 | Other | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR502943 | HR-TB | None | ERR323107 | Other | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323066 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067681 | HR-TB | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR12015084 | Other | lineage4.8 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR12015086 | Other | lineage4.8 | None | ERR3445504 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR363453 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797264 | Sensitive | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798099 | Other | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR12015085 | Other | lineage4.8 | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | ERR6358979 | Other | None | ERR4812155 | Sensitive | None | ERR6866022 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | SRR10808805 | Sensitive | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Other | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | DRR261137 | Other | lineage1.1.1 | None |
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