Rv0667 - c.1053T>C
Drug resistance types
60 Sensitive
4 RR-TB
121 HR-TB
29 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
86 Other
lineage Counts
| lineage | Count |
|---|---|
| 129 | |
| lineage4.9 | 21 |
| lineage4.1.1.3 | 2 |
| lineage3.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage2.2.1 | 23 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3 | 4 |
| lineage4.1.2 | 3 |
| lineage4.8 | 4 |
| lineage4 | 41 |
| lineage4.6.2.2 | 5 |
| lineage4.1.2.1 | 14 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage3.1 | 4 |
| lineage1.1 | 1 |
| lineage2.2 | 5 |
| lineage5.2 | 4 |
| lineage4.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 3 |
| La1 | 1 |
| La1.8.1 | 3 |
| La1.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.1.1 | 4 |
| La3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2 | 2 |
| lineage4.5 | 1 |
| lineage4.9;La1 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 310 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2229143 | Other | lineage4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341453 | Sensitive | None | ERR4818347 | Other | lineage4.1.2 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR3275201 | Sensitive | lineage4.8 | nl | SRR5341387 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341302 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR2514692 | Other | None | SRR5341319 | Other | lineage3 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2446570 | Sensitive | lineage4.8 | nl | ERR4821053 | Other | lineage3 | None | SRR6045526 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046482 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872093 | MDR-TB | lineage5.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR294248 | HR-TB | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323041 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035122 | Sensitive | None | ERR1063859 | HR-TB | None | ERR323055 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283010 | Other | La1 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR387051 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797083 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4811142 | MDR-TB | None | ERR6358979 | Other | None | ERR6198317 | Other | La1.2 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR6358837 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736835 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119499 | MDR-TB | lineage5.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786604 | Other | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR10808399 | Sensitive | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9786843 | Other | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175049 | RR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1175090 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184388 | Other | None | SRR1184372 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1196768 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR13837499 | Sensitive | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13837514 | Sensitive | lineage4.9 | None | SRR13837502 | Sensitive | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13837796 | Sensitive | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR23961549 | Other | La1.2 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6325445 | HR-TB | None | ERR4815310 | Other | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675465 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675236 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4815010 | Sensitive | lineage4.1.2.1 | None | ERR176751 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR212121 | HR-TB | None |
|---|
