Rv1221 - c.378T>C


Drug resistance types
67 Sensitive 10 RR-TB 77 HR-TB 36 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 83 Other
lineage Counts
lineage Count
lineage4.9 110
lineage4.9;lineage9 2
La3;lineage4.9 8
M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La1.7;M.canetti;lineage4.9 5
La1.8.1 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.1 9
M.canetti;lineage1 1
lineage4.3.4.2.1 1
lineage4 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 2
La1.7.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.3 2
lineage4.2.1 1
lineage4.1.2.1 4
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.9 16
lineage2.2.1.1 1
lineage4.8 1
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9;lineage7 3
lineage4.3.2;lineage4.9 1
La1.7.1 2
lineage2.1;lineage4.9;lineage7 1
lineage3 2
lineage1;lineage4.9 1
La1.7 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
2
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage2.1;lineage4.3.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 2
La2;lineage4.9;lineage9 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.3.4.1 3
La1.7;lineage4.9 9
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage1.1.1;lineage4 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
lineage1.1.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9;lineage6.1.3 1
lineage2.1;lineage4.9;lineage6.3 2
lineage2.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4 1
M.canetti;lineage2.1;lineage4 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 2
La1.6;La3;lineage4.9 1
La2;lineage4.9 2
lineage1.2.1.1 1
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.1.3.1 1
lineage6.1.3 1
lineage6.1.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage3.1;lineage9 1
La1.7;lineage4.9;lineage6 1
lineage4.5 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 277
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283011 Other La3;lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR3273109 HR-TB lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6046564 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4816151 Sensitive lineage4.8 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
SRR17832802 HR-TB lineage3 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR3283042 Other lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR176651 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR3468607 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063896 Sensitive None
ERR11465597 Sensitive lineage4.1.2.1 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4820773 HR-TB lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR124636 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675387 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044835 Other lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR5341469 HR-TB lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR28351339 MDR-TB lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6044815 Other lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR3275196 Other lineage2.2.1 nl
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797029 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675522 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1159378 Other lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR5341345 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798504 RR-TB lineage3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR161037 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR3799304 Other lineage6.1.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR9787014 Other lineage6.1.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR387051 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR369151 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR3675267 Other La1.7;lineage4.9 None