Rv0486 - c.-675A>G
Drug resistance types
0 Sensitive
2 RR-TB
16 HR-TB
19 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6 | 6 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9 | 4 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.2.BCG | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| 1 | |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR130092 | MDR-TB | lineage2.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR11268037 | Other | La1.6 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR11068826 | Other | La1.6 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4814355 | Other | La1.6 | gb | ERR553061 | Other | La1.6 | de | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR11267975 | Other | La1.6 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR987722 | MDR-TB | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR10993947 | Other | La1.6 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
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